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L2_013_371G1_scaffold_169

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Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_169_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3..761)
DNA (759bp) protein (253aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6S5_9ACTN
Thymidylate synthase {ECO:0000313|EMBL:KGI73432.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_013_371G1_scaffold_169_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

928..1692
DNA (765bp) protein (255aa)
Dinitrogenase iron-molybdenum cofactor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6S6_9ACTN
Dinitrogenase iron-molybdenum cofactor {ECO:0000313|EMBL:EBA40435.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_013_371G1_scaffold_169_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(1809..3284)
DNA (1476bp) protein (492aa)
Signal recognition particle protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3M0_9ACTN
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
signal recognition particle subunit FFH/SRP54 (srp54)
L2_013_371G1_scaffold_169_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3295..4212)
DNA (918bp) protein (306aa)
Signal recognition particle receptor FtsY n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6S8_9ACTN
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
signal recognition particle-docking protein FtsY
L2_013_371G1_scaffold_169_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4212..7748)
DNA (3537bp) protein (1179aa)
Chromosome partition protein Smc n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6S9_9ACTN
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
condensin subunit Smc
L2_013_371G1_scaffold_169_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7759..8484)
DNA (726bp) protein (242aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6T0_9ACTN
L2_013_371G1_scaffold_169_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8488..8730)
DNA (243bp) protein (81aa)
Acyl carrier protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6T1_9ACTN
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
phosphopantetheine-binding protein
L2_013_371G1_scaffold_169_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8844..9863)
DNA (1020bp) protein (340aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Phosphate acyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6T2_9ACTN
phosphate:acyl-(acyl carrier protein) acyltransferase
L2_013_371G1_scaffold_169_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(9951..10130)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIX4_9ACTN
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
LSU ribosomal protein L32P
L2_013_371G1_scaffold_169_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10195..10749)
DNA (555bp) protein (185aa)
Putative ACR COG1399 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCG2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73423.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_013_371G1_scaffold_169_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10749..11246)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6T4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40443.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_013_371G1_scaffold_169_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11315..11812)
DNA (498bp) protein (166aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6T5_9ACTN
L2_013_371G1_scaffold_169_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11805..12449)
DNA (645bp) protein (215aa)
RNA methyltransferase, RsmD family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6T6_9ACTN
RsmD family RNA methyltransferase {ECO:0000313|EMBL:KGI73420.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
methyltransferase
L2_013_371G1_scaffold_169_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12446..14623)
DNA (2178bp) protein (726aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
Putative ATP-dependent DNA helicase RecG n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6T7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73419.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_013_371G1_scaffold_169_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14634..16295)
DNA (1662bp) protein (554aa)
DAK2 domain fusion protein YloV n=2 Tax=Collinsella RepID=A4E6T8_9ACTN
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EBA40447.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DAK2 domain fusion protein YloV
L2_013_371G1_scaffold_169_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16323..16679)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPV0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73417.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_013_371G1_scaffold_169_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17218..18567)
DNA (1350bp) protein (450aa)
RNA polymerase sigma factor SigA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U1_9ACTN
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
RNA polymerase sigma-70 subunit RpoD
L2_013_371G1_scaffold_169_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18678..20786)
DNA (2109bp) protein (703aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Putative DNA primase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U2_9ACTN
DNA primase
L2_013_371G1_scaffold_169_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20779..21786)
DNA (1008bp) protein (336aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
FMN adenylyltransferase; riboflavin kinase (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein RibF n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U3_9ACTN
L2_013_371G1_scaffold_169_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21783..22715)
DNA (933bp) protein (311aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U4_9ACTN
L2_013_371G1_scaffold_169_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22731..23774)
DNA (1044bp) protein (348aa)
DHHA1 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73483.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphoesterase RecJ domain-containing protein
L2_013_371G1_scaffold_169_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23767..24177)
DNA (411bp) protein (137aa)
Ribosome-binding factor A n=2 Tax=Collinsella RepID=A4E6U6_9ACTN
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ribosome-binding factor A
L2_013_371G1_scaffold_169_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24189..26903)
DNA (2715bp) protein (905aa)
Translation initiation factor IF-2 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U7_9ACTN
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
translation initiation factor IF-2
L2_013_371G1_scaffold_169_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26995..28242)
DNA (1248bp) protein (416aa)
Transcription termination factor NusA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U9_9ACTN
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
NusA antitermination factor
L2_013_371G1_scaffold_169_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28244..28738)
DNA (495bp) protein (165aa)
Ribosome maturation factor RimP n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1R4_9ACTN
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_013_371G1_scaffold_169_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(28997..31573)
DNA (2577bp) protein (859aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLI0_9ACTN
L2_013_371G1_scaffold_169_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31836..33347)
DNA (1512bp) protein (504aa)
Inosine 5-monophosphate dehydrogenase {ECO:0000313|EMBL:EBA40462.1}; EC=1.1.1.205 {ECO:0000313|EMBL:EBA40462.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
IMP dehydrogenase (EC:1.1.1.205)
Inosine 5-monophosphate dehydrogenase n=2 Tax=Collinsella RepID=A4E6V3_9ACTN
L2_013_371G1_scaffold_169_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33541..33885
DNA (345bp) protein (115aa)
Transcriptional regulator LysR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZEW8_9ACTN
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDA35109.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
N-terminal domain of molybdenum-binding protein
L2_013_371G1_scaffold_169_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33875..34879)
DNA (1005bp) protein (335aa)
Cys/Met metabolism PLP-dependent enzyme n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6V5_9ACTN
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:EBA40464.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Cys/Met metabolism pyridoxal-phosphate-dependent protein
L2_013_371G1_scaffold_169_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34975..36513)
DNA (1539bp) protein (513aa)
Glycosyl hydrolase family 32 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6V6_9ACTN
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EBA40465.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glycosyl transferase family protein
Displaying items 1-30 of 58 in total

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