ggKbase home page

L2_013_371G1_scaffold_479

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_479_1
unknown

Not on your lists

comp(2..73)
DNA (72bp) protein (24aa)

This feature has no annotations

L2_013_371G1_scaffold_479_2
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(949..1464)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D4D4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK17331.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas entomophila (strain L48).;"
L2_013_371G1_scaffold_479_3
unknown

Not on your lists

comp(1506..2693)
DNA (1188bp) protein (396aa)

This feature has no annotations

L2_013_371G1_scaffold_479_4
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2686..3066)
DNA (381bp) protein (127aa)
hypothetical protein
Putative uncharacterized protein id=3419863 bin=GWF2_Clostridiales_38_85 species=Clostridiales genomosp. BVAB3 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Uncharacterized protein {ECO:0000313|EMBL:AHF01983.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
L2_013_371G1_scaffold_479_5
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3432..4787)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D7S1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD86669.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
L2_013_371G1_scaffold_479_6
unknown

Not on your lists

comp(5092..5274)
DNA (183bp) protein (61aa)

This feature has no annotations

L2_013_371G1_scaffold_479_7
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5440..6864)
DNA (1425bp) protein (475aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E9L3_9ACTN
Reverse transcriptase (RNA-dependent DNA polymerase).
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:CBL04410.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L2_013_371G1_scaffold_479_8
unknown

Not on your lists

7432..8721
DNA (1290bp) protein (430aa)

This feature has no annotations

L2_013_371G1_scaffold_479_9
unknown

Not on your lists

8864..9133
DNA (270bp) protein (90aa)

This feature has no annotations

L2_013_371G1_scaffold_479_10
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9284..10411)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CL09T03C10 RepID=K5CJU1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ90021.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
L2_013_371G1_scaffold_479_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10521..11600)
DNA (1080bp) protein (360aa)
Uncharacterized protein {ECO:0000313|EMBL:BAR03772.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
DNA helicase II / ATP-dependent DNA helicase PcrA id=1697024 bin=GWA2__Bacteriovorax-rel_49_15 species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
hypothetical protein
L2_013_371G1_scaffold_479_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11590..12702)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU00_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70851.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
DNA recombination protein
L2_013_371G1_scaffold_479_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12903..13262)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU00_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70851.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_013_371G1_scaffold_479_14
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13718..16066)
DNA (2349bp) protein (783aa)
Putative phage tail component domain protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D7R8_9ACTN
Putative phage tail component domain protein {ECO:0000313|EMBL:CDD86664.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
ATPase associated with various cellular activities family protein
L2_013_371G1_scaffold_479_15
Slackia sp. CM382, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16128..16889)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Slackia sp. CM382 RepID=J5XVU5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJU32137.1}; TaxID=1111137 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia sp. CM382.;"
nucleotide-binding protein
L2_013_371G1_scaffold_479_16
Slackia sp. CM382, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16932..17372)
DNA (441bp) protein (147aa)
PF03235 family protein n=1 Tax=Slackia sp. CM382 RepID=J5VRZ8_9ACTN
PF03235 family protein {ECO:0000313|EMBL:EJU32089.1}; TaxID=1111137 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia sp. CM382.;"
hypothetical protein
L2_013_371G1_scaffold_479_17
Slackia sp. CM382, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17403..17537)
DNA (135bp) protein (45aa)
PF03235 family protein n=1 Tax=Slackia sp. CM382 RepID=J5VRZ8_9ACTN
PF03235 family protein {ECO:0000313|EMBL:EJU32089.1}; TaxID=1111137 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia sp. CM382.;"
L2_013_371G1_scaffold_479_18
unknown

Not on your lists

comp(17495..17620)
DNA (126bp) protein (42aa)

This feature has no annotations

L2_013_371G1_scaffold_479_19
unknown

Not on your lists

comp(17634..18194)
DNA (561bp) protein (187aa)

This feature has no annotations

L2_013_371G1_scaffold_479_20
unknown

Not on your lists

comp(18170..18592)
DNA (423bp) protein (141aa)

This feature has no annotations

L2_013_371G1_scaffold_479_21
Slackia sp. CM382, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18639..18926
DNA (288bp) protein (96aa)
Integrase core domain protein n=1 Tax=Slackia sp. CM382 RepID=J6IJ63_9ACTN
Integrase core domain protein {ECO:0000313|EMBL:EJU32128.1}; TaxID=1111137 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia sp. CM382.;"
hypothetical protein
L2_013_371G1_scaffold_479_22
unknown

Not on your lists

comp(19152..19748)
DNA (597bp) protein (199aa)

This feature has no annotations

L2_013_371G1_scaffold_479_23
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20235..20933)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LUC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY76577.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L2_013_371G1_scaffold_479_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20980..21906)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED76_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73245.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_013_371G1_scaffold_479_25
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22081..23082
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KX54_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EOS50786.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
hypothetical protein
L2_013_371G1_scaffold_479_26
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23458..25140)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HNM0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86026.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative Trypsin-like serine proteases
L2_013_371G1_scaffold_479_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25680..26405)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED76_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73245.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Displaying 27 items

View Taxonomy