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L2_013_371G1_scaffold_493

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_493_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1..1080)
DNA (1080bp) protein (360aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1Z4_9ACTN
integral membrane sensor signal transduction histidine kinase
L2_013_371G1_scaffold_493_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1092..1814)
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=2 Tax=Collinsella RepID=A4ECU0_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA35203.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
two component transcriptional regulator, winged helix family
L2_013_371G1_scaffold_493_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1968..3179)
DNA (1212bp) protein (404aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75743.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_013_371G1_scaffold_493_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3179..3442)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8J8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35205.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_013_371G1_scaffold_493_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3571..4917)
DNA (1347bp) protein (449aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT7_9ACTN
L2_013_371G1_scaffold_493_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5715..9146
DNA (3432bp) protein (1144aa)
TQXA domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT6_9ACTN
TQXA domain protein {ECO:0000313|EMBL:EBA38621.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Cna B domain-containing protein
L2_013_371G1_scaffold_493_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9213..9431)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5V2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35093.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_013_371G1_scaffold_493_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9453..12629)
DNA (3177bp) protein (1059aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38620.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_013_371G1_scaffold_493_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12828..13850
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75749.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
helix-turn-helix type 11 domain-containing protein
L2_013_371G1_scaffold_493_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13837..14754
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8A2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75750.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
protein pafC
L2_013_371G1_scaffold_493_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14751..17645)
DNA (2895bp) protein (965aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
Putative DnaQ family exonuclease/DinG family helicase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT2_9ACTN
Putative DnaQ family exonuclease/DinG family helicase {ECO:0000313|EMBL:EBA38617.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_013_371G1_scaffold_493_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17639..18604)
DNA (966bp) protein (322aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5U7_9ACTN
L2_013_371G1_scaffold_493_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18690..19742
DNA (1053bp) protein (351aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT0_9ACTN
L2_013_371G1_scaffold_493_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19941..20195)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFF8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75754.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_013_371G1_scaffold_493_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20185..21090)
DNA (906bp) protein (302aa)
ParB-like protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Z2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75755.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
parB-like partition protein
L2_013_371G1_scaffold_493_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21083..21883)
DNA (801bp) protein (267aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5ZM18_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75756.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
chromosome segregation ATPase
L2_013_371G1_scaffold_493_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22018..22755)
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS6_9ACTN
methyltransferase GidB
L2_013_371G1_scaffold_493_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22852..23421)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6I4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35323.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
single-stranded nucleic acid binding R3H domain-containing protein
L2_013_371G1_scaffold_493_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23466..24236)
DNA (771bp) protein (257aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS4_9ACTN
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:EBA38609.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
YidC/Oxa1 family membrane protein insertase
L2_013_371G1_scaffold_493_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24266..24490)
DNA (225bp) protein (75aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Z7_9ACTN
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_013_371G1_scaffold_493_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24487..24825)
DNA (339bp) protein (113aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Ribonuclease P protein component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS3_9ACTN
ribonuclease P protein component
L2_013_371G1_scaffold_493_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(24846..25001)
DNA (156bp) protein (52aa)
50S ribosomal protein L34 n=3 Tax=Collinsella RepID=A4ECS2_9ACTN
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
LSU ribosomal protein L34P
L2_013_371G1_scaffold_493_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25326..26171
DNA (846bp) protein (282aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS1_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EBA38606.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ATP-binding region ATPase domain-containing protein
L2_013_371G1_scaffold_493_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26278..26535
DNA (258bp) protein (86aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6I9_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA35328.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator, MarR family
L2_013_371G1_scaffold_493_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26551..27867
DNA (1317bp) protein (439aa)
Chromosomal replication initiator protein dnaA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS0_9ACTN
Chromosomal replication initiator protein dnaA {ECO:0000256|RuleBase:RU000577}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
chromosomal replication initiator protein DnaA
Displaying 25 items

View Taxonomy