ggKbase home page

L2_013_371G1_scaffold_533

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_533_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(164..2011)
DNA (1848bp) protein (616aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLS8_9ACTN
L2_013_371G1_scaffold_533_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2278..3432
DNA (1155bp) protein (385aa)
Transcriptional regulator, LacI family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB85_9ACTN
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EBA39089.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LacI family transcriptional regulator
L2_013_371G1_scaffold_533_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3546..4196)
DNA (651bp) protein (217aa)
HAD hydrolase family IA variant 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF64_9ACTN
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDA35224.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
HAD family hydrolase
L2_013_371G1_scaffold_533_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4370..5248
DNA (879bp) protein (293aa)
Putative TIGR00268 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB83_9ACTN
Putative TIGR00268 family protein {ECO:0000313|EMBL:EBA39087.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_013_371G1_scaffold_533_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5545..7239)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLT5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72763.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transcriptional regulator
L2_013_371G1_scaffold_533_6
unknown

Not on your lists

comp(7471..7692)
DNA (222bp) protein (74aa)

This feature has no annotations

L2_013_371G1_scaffold_533_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7705..8688
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9T4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36463.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_013_371G1_scaffold_533_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8803..10878)
DNA (2076bp) protein (692aa)
Putative translation elongation factor G n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC65_9ACTN
Putative translation elongation factor G {ECO:0000313|EMBL:CDA36460.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
translation elongation factor 2 (EF-2/EF-G)
L2_013_371G1_scaffold_533_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11189..11953)
DNA (765bp) protein (255aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB70_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72760.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter-like protein
L2_013_371G1_scaffold_533_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11946..12599)
DNA (654bp) protein (218aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB69_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EBA39073.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter permease component
L2_013_371G1_scaffold_533_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12599..13459)
DNA (861bp) protein (287aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9S7_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDA36458.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
family 3 extracellular solute-binding protein
L2_013_371G1_scaffold_533_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13799..15247
DNA (1449bp) protein (483aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EBA39071.1}; EC=2.1.1.- {ECO:0000313|EMBL:EBA39071.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB67_9ACTN
RNA methyltransferase, TrmA family
L2_013_371G1_scaffold_533_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15314..16135)
DNA (822bp) protein (274aa)
Putative hydrolase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQ02_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72756.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PHP domain-containing protein
L2_013_371G1_scaffold_533_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16295..17584)
DNA (1290bp) protein (430aa)
Aminotransferase, class I/II n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB65_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72755.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
class I and II aminotransferase
L2_013_371G1_scaffold_533_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17675..19810)
DNA (2136bp) protein (712aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIM1_9ACTN
L2_013_371G1_scaffold_533_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19812..20360)
DNA (549bp) protein (183aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9S2_9ACTN
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDA36453.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_013_371G1_scaffold_533_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20508..22046)
DNA (1539bp) protein (513aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5R3_9ACTN
tRNA(Ile)-lysidine synthetase
L2_013_371G1_scaffold_533_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22095..22904
DNA (810bp) protein (270aa)
Metallo-beta-lactamase domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB61_9ACTN
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EBA39065.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
beta-lactamase domain-containing protein
L2_013_371G1_scaffold_533_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22987..23418)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC53_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72750.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
heat shock protein Hsp20
L2_013_371G1_scaffold_533_20
unknown

Not on your lists

comp(23684..23875)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 20 items

View Taxonomy