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L2_019_000G1_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 273 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_6_1
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..611)
DNA (609bp) protein (203aa)
phosphoribosyl-ATP pyrophosphohydrolase (EC:3.5.4.19 3.6.1.31 4.1.3.-)
Phosphoribosyl-AMP cyclohydrolase n=2 Tax=Anaerostipes RepID=E5VU10_9FIRM
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
L2_019_000G1_scaffold_6_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

916..1491
DNA (576bp) protein (192aa)
UPI0003D66F04 related cluster n=1 Tax=unknown RepID=UPI0003D66F04
Uncharacterized protein {ECO:0000313|EMBL:ETI82514.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_000G1_scaffold_6_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1451..2362
DNA (912bp) protein (304aa)
UPI0003D601BF related cluster n=1 Tax=unknown RepID=UPI0003D601BF
Uncharacterized protein {ECO:0000313|EMBL:ETI82515.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_000G1_scaffold_6_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2590..4107)
DNA (1518bp) protein (506aa)
UPI0003D5B94F related cluster n=1 Tax=unknown RepID=UPI0003D5B94F
Uncharacterized protein {ECO:0000313|EMBL:ETI82516.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
xylulokinase
L2_019_000G1_scaffold_6_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4652..5341
DNA (690bp) protein (230aa)
UPI0003D5B3D6 related cluster n=1 Tax=unknown RepID=UPI0003D5B3D6
Uncharacterized protein {ECO:0000313|EMBL:ETI82517.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_000G1_scaffold_6_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6170..8650
DNA (2481bp) protein (827aa)
UPI0003D5C8F7 related cluster n=1 Tax=unknown RepID=UPI0003D5C8F7
Uncharacterized protein {ECO:0000313|EMBL:ETI82584.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_000G1_scaffold_6_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8656..9252
DNA (597bp) protein (199aa)
UPI0003D5C197 related cluster n=1 Tax=unknown RepID=UPI0003D5C197
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
recombination protein RecR
L2_019_000G1_scaffold_6_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9438..10745
DNA (1308bp) protein (436aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ask; aspartate kinase (EC:2.7.2.4)
UPI0003D61563 related cluster n=1 Tax=unknown RepID=UPI0003D61563
L2_019_000G1_scaffold_6_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10742..11791
DNA (1050bp) protein (350aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5E1E3 related cluster n=1 Tax=unknown RepID=UPI0003D5E1E3
aspartate-semialdehyde dehydrogenase
L2_019_000G1_scaffold_6_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11923..13173)
DNA (1251bp) protein (417aa)
UPI0003D660F6 related cluster n=1 Tax=unknown RepID=UPI0003D660F6
Uncharacterized protein {ECO:0000313|EMBL:ETI82588.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_000G1_scaffold_6_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13338..14057)
DNA (720bp) protein (240aa)
UPI0003D6862E related cluster n=1 Tax=unknown RepID=UPI0003D6862E
TetR family transcriptional regulator {ECO:0000313|EMBL:ETI82589.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
TetR family transcriptional regulator
L2_019_000G1_scaffold_6_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14278..15501
DNA (1224bp) protein (408aa)
UPI0003D5F1D8 related cluster n=1 Tax=unknown RepID=UPI0003D5F1D8
Uncharacterized protein {ECO:0000313|EMBL:ETI82590.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fucose permease
L2_019_000G1_scaffold_6_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15804..16790
DNA (987bp) protein (329aa)
UPI0003D64A63 related cluster n=1 Tax=unknown RepID=UPI0003D64A63
OFeT family Fe2+ permease {ECO:0000313|EMBL:ETI82591.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ferrous iron permease EfeU
L2_019_000G1_scaffold_6_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16853..18091
DNA (1239bp) protein (413aa)
peptidase M75 n=1 Tax=Varibaculum cambriense RepID=UPI0003B3CAE4
Uncharacterized protein {ECO:0000313|EMBL:ETI82592.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
lipoprotein
L2_019_000G1_scaffold_6_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18104..19468
DNA (1365bp) protein (455aa)
peroxidase (EC:1.11.1.-)
peroxidase n=1 Tax=Varibaculum cambriense RepID=UPI0003B77A07
Uncharacterized protein {ECO:0000313|EMBL:ETI82593.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_000G1_scaffold_6_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19687..21003
DNA (1317bp) protein (439aa)
UPI0003D63E74 related cluster n=1 Tax=unknown RepID=UPI0003D63E74
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ETI82594.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
major facilitator superfamily MFS 1
L2_019_000G1_scaffold_6_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21290..23917
DNA (2628bp) protein (876aa)
UPI0003D5E2F7 related cluster n=1 Tax=unknown RepID=UPI0003D5E2F7
Uncharacterized protein {ECO:0000313|EMBL:ETI82595.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
iron-containing alcohol dehydrogenase
L2_019_000G1_scaffold_6_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24002..24967)
DNA (966bp) protein (322aa)
UPI0003D5DD72 related cluster n=1 Tax=unknown RepID=UPI0003D5DD72
Uncharacterized protein {ECO:0000313|EMBL:ETI82596.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative fructokinase
L2_019_000G1_scaffold_6_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25228..26091)
DNA (864bp) protein (288aa)
zinc ABC transporter permease n=1 Tax=Varibaculum cambriense RepID=UPI0003B73D6C
Mn2+, Zn2+ ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETI82597.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
zinc ABC transporter permease
L2_019_000G1_scaffold_6_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26088..27233)
DNA (1146bp) protein (382aa)
UPI0003D607B1 related cluster n=1 Tax=unknown RepID=UPI0003D607B1
Mn2+, Zn2+ ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETI82598.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
zinc ABC transporter permease
L2_019_000G1_scaffold_6_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27230..28018)
DNA (789bp) protein (263aa)
UPI0003D5EC58 related cluster n=1 Tax=unknown RepID=UPI0003D5EC58
ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:ETI82599.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
manganese ABC transporter ATP-binding protein
L2_019_000G1_scaffold_6_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28134..29072)
DNA (939bp) protein (313aa)
UPI0003D61886 related cluster n=1 Tax=unknown RepID=UPI0003D61886
Uncharacterized protein {ECO:0000313|EMBL:ETI82600.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
iron ABC transporter substrate-binding protein
L2_019_000G1_scaffold_6_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29456..30913)
DNA (1458bp) protein (486aa)
UPI0003D5F842 related cluster n=1 Tax=unknown RepID=UPI0003D5F842
Uncharacterized protein {ECO:0000313|EMBL:ETI82602.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
permease
L2_019_000G1_scaffold_6_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30914..31624)
DNA (711bp) protein (237aa)
UPI0003D685CC related cluster n=1 Tax=unknown RepID=UPI0003D685CC
Uncharacterized protein {ECO:0000313|EMBL:ETI82603.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein
L2_019_000G1_scaffold_6_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31947..33581
DNA (1635bp) protein (545aa)
UPI0003D6435A related cluster n=1 Tax=unknown RepID=UPI0003D6435A
Uncharacterized protein {ECO:0000313|EMBL:ETI82604.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein
L2_019_000G1_scaffold_6_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33624..33818
DNA (195bp) protein (65aa)
UPI0003D59EFA related cluster n=1 Tax=unknown RepID=UPI0003D59EFA
Uncharacterized protein {ECO:0000313|EMBL:ETI82605.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
damage-inducible protein J
L2_019_000G1_scaffold_6_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34159..34443)
DNA (285bp) protein (95aa)
UPI0003D67940 related cluster n=1 Tax=unknown RepID=UPI0003D67940
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:ETI82607.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_000G1_scaffold_6_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34430..34684)
DNA (255bp) protein (85aa)
UPI0003D69958 related cluster n=1 Tax=unknown RepID=UPI0003D69958
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold protein {ECO:0000313|EMBL:ETI82608.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
antitoxin
L2_019_000G1_scaffold_6_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34968..35234)
DNA (267bp) protein (89aa)
UPI0003D68C16 related cluster n=1 Tax=unknown RepID=UPI0003D68C16
Plasmid stabilization system protein {ECO:0000313|EMBL:ETI82609.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
RelE/StbE family addiction module toxin
L2_019_000G1_scaffold_6_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35218..35493)
DNA (276bp) protein (92aa)
UPI0003D5A816 related cluster n=1 Tax=unknown RepID=UPI0003D5A816
Uncharacterized protein {ECO:0000313|EMBL:ETI82610.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
addiction module antitoxin, RelB/DinJ family
Displaying items 1-30 of 273 in total

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