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L2_019_000G1_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 302 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_9_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(129..1283)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K2H8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48290.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Site-specific recombinase XerD
L2_019_000G1_scaffold_9_2
unknown

Not on your lists

comp(1979..2071)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_019_000G1_scaffold_9_3
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2873..3262
DNA (390bp) protein (130aa)
Repeat protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZJJ4_9ACTN
Repeat protein {ECO:0000313|EMBL:CDD43574.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
L2_019_000G1_scaffold_9_4
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(3466..4347)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HAV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21876.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
N-acetylmuramidase, autolytic enzyme, family 25 glycosyl hydrolase
L2_019_000G1_scaffold_9_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4316..4816)
DNA (501bp) protein (167aa)
Toxin secretion/phage lysis holin n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CKA9_9CLOT
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:ENZ57659.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hol; holin
L2_019_000G1_scaffold_9_6
unknown

Not on your lists

comp(4832..5050)
DNA (219bp) protein (73aa)

This feature has no annotations

L2_019_000G1_scaffold_9_7
unknown

Not on your lists

comp(5047..5412)
DNA (366bp) protein (122aa)

This feature has no annotations

L2_019_000G1_scaffold_9_8
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5399..6661)
DNA (1263bp) protein (421aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDH7_CLOSV
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:EDS07406.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Retron-type reverse transcriptase
L2_019_000G1_scaffold_9_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6998..8563)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDH6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS07405.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Phage protein
L2_019_000G1_scaffold_9_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8556..9584)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAR8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08226.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_019_000G1_scaffold_9_11
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9600..10721)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAR9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08227.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_019_000G1_scaffold_9_12
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10733..11593)
DNA (861bp) protein (287aa)
Putative phage tail component domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAS0_CLOSV
Putative phage tail component domain protein {ECO:0000313|EMBL:EDS08228.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Phage tail protein.
L2_019_000G1_scaffold_9_13
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11608..14412)
DNA (2805bp) protein (935aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AZQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDG04253.1}; TaxID=1137134 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. lactis A12.;"
hypothetical protein
L2_019_000G1_scaffold_9_14
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14414..14590)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAS2_CLOSV
hypothetical protein
Tax=BJP_IG2069_Clostridiales_42_11
L2_019_000G1_scaffold_9_15
unknown

Not on your lists

comp(14680..15054)
DNA (375bp) protein (125aa)

This feature has no annotations

L2_019_000G1_scaffold_9_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15118..15840)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y3E5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA11197.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_019_000G1_scaffold_9_17
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15846..16163)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4JX56_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK95407.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L2_019_000G1_scaffold_9_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16160..16567)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00035DAFC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD23435.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_019_000G1_scaffold_9_19
unknown

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comp(16564..16899)
DNA (336bp) protein (112aa)

This feature has no annotations

L2_019_000G1_scaffold_9_20
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16883..17215)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K4D2_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO51113.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
L2_019_000G1_scaffold_9_21
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17278..18618)
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J7R1_DESRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO51114.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
L2_019_000G1_scaffold_9_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18624..19532)
DNA (909bp) protein (303aa)
Peptidase S14 ClpP {ECO:0000313|EMBL:CEQ26630.1}; EC=3.4.21.92 {ECO:0000313|EMBL:CEQ26630.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9KBU5_9FIRM
peptidase S14 ClpP
L2_019_000G1_scaffold_9_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19536..20687)
DNA (1152bp) protein (384aa)
Phage portal protein, HK97 family n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BB55_CLOBO
Phage portal protein, HK97 family {ECO:0000313|EMBL:EDS77260.1}; TaxID=445337 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Eklund.;"
phage portal protein, HK97 family
L2_019_000G1_scaffold_9_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20707..22368)
DNA (1662bp) protein (554aa)
UPI0003D64697 related cluster n=1 Tax=unknown RepID=UPI0003D64697
Uncharacterized protein {ECO:0000313|EMBL:ETI96921.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
phage terminase-like protein, large subunit
L2_019_000G1_scaffold_9_25
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22352..22816)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R1F1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF44797.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L2_019_000G1_scaffold_9_26
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22813..23169)
DNA (357bp) protein (119aa)
Putative restriction endonuclease n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3Y9_9FIRM
Putative restriction endonuclease {ECO:0000313|EMBL:CDF44798.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
phage-like protein
L2_019_000G1_scaffold_9_27
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23405..23833)
DNA (429bp) protein (143aa)
Single-stranded DNA-binding protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R2A3_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
single-strand binding protein
L2_019_000G1_scaffold_9_28
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24152..24478)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R4K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF44801.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L2_019_000G1_scaffold_9_29
unknown

Not on your lists

comp(24438..24608)
DNA (171bp) protein (57aa)

This feature has no annotations

L2_019_000G1_scaffold_9_30
unknown

Not on your lists

comp(24605..24871)
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying items 1-30 of 302 in total

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