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L2_019_000G1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 179 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_18_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(104..523)
DNA (420bp) protein (140aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0K6_CLOBU
DUF327 domain-containing protein {ECO:0000313|EMBL:KJZ83098.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_019_000G1_scaffold_18_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(610..4266)
DNA (3657bp) protein (1219aa)
UPI0003D62864 related cluster n=1 Tax=unknown RepID=UPI0003D62864
Peptidase S8 {ECO:0000313|EMBL:KHD15635.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
subtilisin like protease
L2_019_000G1_scaffold_18_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4543..4845
DNA (303bp) protein (101aa)
UPI0003D5F07D related cluster n=1 Tax=unknown RepID=UPI0003D5F07D
Uncharacterized protein {ECO:0000313|EMBL:KHD15636.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_000G1_scaffold_18_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4923..6770)
DNA (1848bp) protein (616aa)
Asparagine synthetase glutamine-hydrolyzing {ECO:0000313|EMBL:KJZ83034.1}; EC=6.3.5.4 {ECO:0000313|EMBL:KJZ83034.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
asnO; asparagine synthetase (EC:6.3.5.4)
Asparagine synthetase n=2 Tax=Clostridium butyricum RepID=M8KC92_CLOBU
L2_019_000G1_scaffold_18_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7047..8471
DNA (1425bp) protein (475aa)
Stage V sporulation protein AF n=4 Tax=Clostridium butyricum RepID=B1R0K2_CLOBU
Stage V sporulation protein AF (SpoVAF) {ECO:0000313|EMBL:KJZ83023.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
spoVAF; stage V sporulation protein AF
L2_019_000G1_scaffold_18_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8519..9742)
DNA (1224bp) protein (408aa)
UPI0003D66E56 related cluster n=1 Tax=unknown RepID=UPI0003D66E56
Uncharacterized protein {ECO:0000313|EMBL:KHD15639.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_000G1_scaffold_18_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9852..10688)
DNA (837bp) protein (279aa)
UPI0003D595F1 related cluster n=1 Tax=unknown RepID=UPI0003D595F1
DNA-binding protein {ECO:0000313|EMBL:KHD15640.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
RNA-binding S1 domain-containing protein
L2_019_000G1_scaffold_18_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10729..11229)
DNA (501bp) protein (167aa)
Carbonic anhydrase/acetyltransferase, isoleucine patch superfamily n=4 Tax=Clostridium butyricum RepID=B1R0J9_CLOBU
Carbonic anhydrase {ECO:0000313|EMBL:ENZ35863.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
carbonic anhydrase
L2_019_000G1_scaffold_18_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11388..12395
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R0J8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53353.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_019_000G1_scaffold_18_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12427..12756)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R0J7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54554.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_019_000G1_scaffold_18_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12993..13460
DNA (468bp) protein (156aa)
Transcriptional regulator, AsnC family n=4 Tax=Clostridium butyricum RepID=B1R0J6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97869.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
AsnC family transcriptional regulator
L2_019_000G1_scaffold_18_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13604..13792
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASX2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35859.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_019_000G1_scaffold_18_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13968..14723
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHL5_CLOBU
Membrane protein {ECO:0000313|EMBL:KHD15689.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
membrane protein
L2_019_000G1_scaffold_18_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14755..16515)
DNA (1761bp) protein (587aa)
UPI0003D5BBCD related cluster n=1 Tax=unknown RepID=UPI0003D5BBCD
Phosphoenolpyruvate carboxykinase {ECO:0000313|EMBL:KHD15690.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_000G1_scaffold_18_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16903..17778
DNA (876bp) protein (292aa)
UPI0003D69640 related cluster n=1 Tax=unknown RepID=UPI0003D69640
Competence protein {ECO:0000313|EMBL:KHD15646.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
comEC1; ComE operon protein 3
L2_019_000G1_scaffold_18_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18048..19505
DNA (1458bp) protein (486aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
gltX; glutamate--tRNA ligase GltX (EC:6.1.1.17)
Glutamate--tRNA ligase n=3 Tax=Clostridium butyricum RepID=C4IHU6_CLOBU
L2_019_000G1_scaffold_18_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19723..20547)
DNA (825bp) protein (275aa)
UPI0003D60E14 related cluster n=1 Tax=unknown RepID=UPI0003D60E14
Exonuclease {ECO:0000313|EMBL:KHD15648.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_000G1_scaffold_18_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20562..21290)
DNA (729bp) protein (243aa)
HAD-superfamily subfamily IB hydrolase n=4 Tax=Clostridium butyricum RepID=B1QTQ0_CLOBU
Haloacid dehalogenase {ECO:0000313|EMBL:KHD15649.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
HAD-superfamily subfamily IB hydrolase
L2_019_000G1_scaffold_18_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21442..22566)
DNA (1125bp) protein (375aa)
UPI0003D5B756 related cluster n=1 Tax=unknown RepID=UPI0003D5B756
Permease {ECO:0000313|EMBL:KHD15650.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
permease
L2_019_000G1_scaffold_18_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22762..24450)
DNA (1689bp) protein (563aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
UPI0003D673CD related cluster n=1 Tax=unknown RepID=UPI0003D673CD
argS; arginyl-tRNA synthetase
L2_019_000G1_scaffold_18_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25023..25652)
DNA (630bp) protein (210aa)
UPI0003D61744 related cluster n=1 Tax=unknown RepID=UPI0003D61744
Protein with metal dependent protease protein {ECO:0000313|EMBL:ETI91131.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
peptidase M50
L2_019_000G1_scaffold_18_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25780..26820)
DNA (1041bp) protein (347aa)
UPI0003D5FB00 related cluster n=1 Tax=unknown RepID=UPI0003D5FB00
Dipeptidyl peptidase IV {ECO:0000313|EMBL:KHD15653.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_000G1_scaffold_18_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26841..27887)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AHK6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97880.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
exopolysaccharide biosynthesis protein
L2_019_000G1_scaffold_18_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28208..29176
DNA (969bp) protein (323aa)
birA; bifunctional protein BirA (EC:6.3.4.15)
UPI0003D5F2CB related cluster n=1 Tax=unknown RepID=UPI0003D5F2CB
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_019_000G1_scaffold_18_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29405..29800)
DNA (396bp) protein (132aa)
UPI00039EDED2 related cluster n=1 Tax=unknown RepID=UPI00039EDED2
Thioesterase {ECO:0000313|EMBL:KHD15656.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
thioesterase family protein
L2_019_000G1_scaffold_18_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29997..31010)
DNA (1014bp) protein (338aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
asnA; asparagine synthetase AsnA (EC:6.3.1.1)
UPI0003A61A79 related cluster n=1 Tax=unknown RepID=UPI0003A61A79
L2_019_000G1_scaffold_18_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31330..32283)
DNA (954bp) protein (318aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ldh1; L-lactate dehydrogenase Ldh (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASV8_CLOBU
L2_019_000G1_scaffold_18_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32518..33135
DNA (618bp) protein (206aa)
Exonuclease n=4 Tax=Clostridium butyricum RepID=B1QTR1_CLOBU
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KHD15659.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
exonuclease, RNase T and DNA polymerase III
L2_019_000G1_scaffold_18_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33502..34212)
DNA (711bp) protein (237aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
UPI0003D59A14 related cluster n=1 Tax=unknown RepID=UPI0003D59A14
pyruvate formate-lyase activating enzyme
L2_019_000G1_scaffold_18_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34474..36705)
DNA (2232bp) protein (744aa)
pflB; formate acetyltransferase (EC:2.3.1.54)
UPI0003D607B9 related cluster n=1 Tax=unknown RepID=UPI0003D607B9
Formate acetyltransferase {ECO:0000313|EMBL:ETI91122.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Displaying items 1-30 of 179 in total

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