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L2_019_000G1_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 220 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_20_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(202..714)
DNA (513bp) protein (171aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ferritin family protein n=7 Tax=Clostridium perfringens RepID=H7CV41_CLOPF
ferritin family protein
L2_019_000G1_scaffold_20_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(859..1683)
DNA (825bp) protein (275aa)
Transcriptional regulator n=2 Tax=Clostridium perfringens RepID=H7CV42_CLOPF
Transcriptional regulator {ECO:0000313|EMBL:EIA17396.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
transcriptional regulator
L2_019_000G1_scaffold_20_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1843..3675
DNA (1833bp) protein (611aa)
Glycosyl hydrolase, family 20 n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BV77_CLOPF
Glycosyl hydrolase, family 20 {ECO:0000313|EMBL:EDT14394.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
glycosyl hydrolase family protein
L2_019_000G1_scaffold_20_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3793..4260
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SU33_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85573.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_019_000G1_scaffold_20_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4381..5157)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XLQ8_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80689.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_20_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5288..6709)
DNA (1422bp) protein (474aa)
Spore germination protein AF n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGZ3_CLOPF
Spore germination protein AF {ECO:0000313|EMBL:EDT26741.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
spoVAF; stage V sporulation protein AF
L2_019_000G1_scaffold_20_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6933..8441)
DNA (1509bp) protein (503aa)
Putatve dicarboxylate transporter n=4 Tax=Clostridium perfringens RepID=Q0TRQ2_CLOP1
dicarboxylate transporter
Putatve dicarboxylate transporter {ECO:0000313|EMBL:EDT71933.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_019_000G1_scaffold_20_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8844..10715
DNA (1872bp) protein (624aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Sensory box histidine kinase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2S6_CLOPF
two-component sensor histidine kinase
L2_019_000G1_scaffold_20_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10939..12006
DNA (1068bp) protein (356aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CV49_CLOPF
hypothetical protein
Probable regulatory protein {ECO:0000313|EMBL:BAB80693.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_20_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12038..12718
DNA (681bp) protein (227aa)
sdhB; L-serine dehydratase, iron-sulfur-dependent subunit beta (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=5 Tax=Clostridium perfringens RepID=H7CV50_CLOPF
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EIA17404.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_000G1_scaffold_20_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12722..13600
DNA (879bp) protein (293aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EDT13333.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDT13333.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=2 Tax=Clostridium perfringens RepID=B1BEG8_CLOPF
L2_019_000G1_scaffold_20_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13668..14402)
DNA (735bp) protein (245aa)
PP-loop family protein n=6 Tax=Clostridium perfringens RepID=Q0SU26_CLOPS
exoenzyme S synthesis protein B
Uncharacterized protein {ECO:0000313|EMBL:BAB80696.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_20_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14609..15355
DNA (747bp) protein (249aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=5 Tax=Clostridium perfringens RepID=H7CV53_CLOPF
L2_019_000G1_scaffold_20_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15422..16489)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XLP9_CLOPE
oxidoreductase, 2-nitropropane dioxygenase
Uncharacterized protein {ECO:0000313|EMBL:BAB80698.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_20_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16690..17400
DNA (711bp) protein (237aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2T2_CLOPF
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EDT71938.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Crp/FNR family transcriptional regulator
L2_019_000G1_scaffold_20_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17456..18367)
DNA (912bp) protein (304aa)
Radical SAM domain protein n=2 Tax=Clostridium perfringens RepID=B1V2T3_CLOPF
Radical SAM domain protein {ECO:0000313|EMBL:EDT71928.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
radical SAM domain-containing protein
L2_019_000G1_scaffold_20_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18511..19545
DNA (1035bp) protein (345aa)
Aminopeptidase n=3 Tax=Clostridium perfringens RepID=H7CV57_CLOPF
aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:EIA17411.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_000G1_scaffold_20_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19864..20535
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP1_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26718.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_019_000G1_scaffold_20_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20551..22227
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SU19_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87539.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_019_000G1_scaffold_20_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22895..24553
DNA (1659bp) protein (553aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEH7_CLOPF
L2_019_000G1_scaffold_20_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24729..24884
DNA (156bp) protein (52aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CV61_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80705.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_20_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25123..25737
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SU16_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87356.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_019_000G1_scaffold_20_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25824..27446)
DNA (1623bp) protein (541aa)
aspartate aminotransferase (EC:2.6.1.1)
L-aspartate beta-decarboxylase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEW5_CLOPF
L-aspartate beta-decarboxylase {ECO:0000313|EMBL:EDS81660.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_019_000G1_scaffold_20_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27578..28603)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8M2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23413.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L2_019_000G1_scaffold_20_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28908..29087
DNA (180bp) protein (60aa)
UPF0291 protein CPE1003 n=11 Tax=Clostridium perfringens RepID=Y1003_CLOPE
hypothetical protein
UPF0291 protein AC3_1380 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_019_000G1_scaffold_20_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29099..30022
DNA (924bp) protein (308aa)
HPr kinase/phosphorylase {ECO:0000255|HAMAP-Rule:MF_01249}; Short=HPrK/P {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.4.- {ECO:0000255|HAMAP-Rule:MF_01249};; HPr(Ser) kinase/phosphorylase {ECO:0000255|HAMAP-Rule:MF_01249}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
HPr kinase/phosphorylase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=HPRK_CLOPE
hprK; HPr kinase/phosphorylase
L2_019_000G1_scaffold_20_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30067..30996
DNA (930bp) protein (310aa)
Putative cation transporter n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RK05_CLOPF
Putative cation transporter {ECO:0000313|EMBL:EDT25692.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
cation transporter
L2_019_000G1_scaffold_20_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31063..32469
DNA (1407bp) protein (469aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
M18 family aminopeptidase n=4 Tax=Clostridium perfringens RepID=Q0TRN1_CLOP1
aminopeptidase 1
L2_019_000G1_scaffold_20_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32594..34117
DNA (1524bp) protein (508aa)
Putative diguanylate cyclase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8M7_CLOPF
Putative diguanylate cyclase {ECO:0000313|EMBL:EDT23357.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
diguanylate cyclase
L2_019_000G1_scaffold_20_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34286..34645
DNA (360bp) protein (120aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Methylglyoxal synthase n=5 Tax=Clostridium perfringens RepID=MGSA_CLOP1
Displaying items 1-30 of 220 in total

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