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L2_019_000G1_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_43_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..267)
DNA (267bp) protein (89aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
fructose-6-phosphate aldolase, TalC/MipB family (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8Z2_CLOBU
L2_019_000G1_scaffold_43_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(308..997)
DNA (690bp) protein (230aa)
Ribulose 5-phosphate epimerase {ECO:0000313|EMBL:KHD16457.1}; EC=5.1.3.4 {ECO:0000313|EMBL:KHD16457.1};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Class II aldolase/adducin family protein n=2 Tax=Clostridium RepID=A6M1T4_CLOB8
sgaE; L-ribulose-5-phosphate 4-epimerase
L2_019_000G1_scaffold_43_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1299..2372)
DNA (1074bp) protein (358aa)
Regulatory protein GntR, HTH n=2 Tax=Clostridium RepID=A6M1T5_CLOB8
GntR family transcriptional regulator {ECO:0000313|EMBL:KHD16456.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
regulatory protein GntR, HTH
L2_019_000G1_scaffold_43_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2744..4213
DNA (1470bp) protein (490aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
araA; L-arabinose isomerase AraA (EC:5.3.1.4)
L-arabinose isomerase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLT5_CLOSA
L2_019_000G1_scaffold_43_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4481..5527
DNA (1047bp) protein (349aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
UPI0003D5E4E7 related cluster n=2 Tax=unknown RepID=UPI0003D5E4E7
aldose 1-epimerase
L2_019_000G1_scaffold_43_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5581..6456)
DNA (876bp) protein (292aa)
Hydrolase, Cof family n=2 Tax=Clostridium butyricum RepID=M8JCW7_CLOBU
Cof-like hydrolase {ECO:0000313|EMBL:ENZ35632.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Cof-like hydrolase
L2_019_000G1_scaffold_43_7

Not on your lists

6593..7252
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JNB8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ36006.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_019_000G1_scaffold_43_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7358..8446)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7F8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35630.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
SCP-like extracellular
L2_019_000G1_scaffold_43_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8938..9630
DNA (693bp) protein (231aa)
PHP C-domain protein n=2 Tax=Clostridium butyricum RepID=M8K8L6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35629.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative metal-dependent phosphoesterase, PHP family
L2_019_000G1_scaffold_43_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9710..11470)
DNA (1761bp) protein (587aa)
recQ1; ATP-dependent DNA helicase RecQ (EC:3.6.4.12)
UPI0003D5ABCE related cluster n=1 Tax=unknown RepID=UPI0003D5ABCE
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ETI88310.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_019_000G1_scaffold_43_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11768..13780)
DNA (2013bp) protein (671aa)
UPI0003D62582 related cluster n=1 Tax=unknown RepID=UPI0003D62582
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ETI88309.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
methyl-accepting chemotaxis sensory transducer with cache sensor
L2_019_000G1_scaffold_43_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14034..14666)
DNA (633bp) protein (211aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
thiE; thiamine-phosphate synthase ThiE (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6X9_CLOBU
L2_019_000G1_scaffold_43_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14723..15556)
DNA (834bp) protein (278aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
UPI0003D64289 related cluster n=1 Tax=unknown RepID=UPI0003D64289
hydroxyethylthiazole kinase
L2_019_000G1_scaffold_43_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15571..16872)
DNA (1302bp) protein (434aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
thiC; phosphomethylpyrimidine synthase ThiC (EC:4.1.99.17)
UPI0003D67320 related cluster n=1 Tax=unknown RepID=UPI0003D67320
L2_019_000G1_scaffold_43_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17075..17905)
DNA (831bp) protein (277aa)
Phosphomethylpyrimidine kinase n=2 Tax=Clostridium butyricum RepID=B1QZC3_CLOBU
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:KHD16446.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
phosphomethylpyrimidine kinase
L2_019_000G1_scaffold_43_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17981..18505)
DNA (525bp) protein (175aa)
UPI0003D65D36 related cluster n=1 Tax=unknown RepID=UPI0003D65D36
ThiW protein {ECO:0000313|EMBL:KHD16445.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
thiW protein
L2_019_000G1_scaffold_43_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18904..20229)
DNA (1326bp) protein (442aa)
MATE efflux family protein n=2 Tax=Clostridium butyricum RepID=C4IM75_CLOBU
MATE efflux family protein {ECO:0000313|EMBL:EEP52704.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
multi antimicrobial extrusion protein MatE
L2_019_000G1_scaffold_43_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20371..21204)
DNA (834bp) protein (278aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=M8JM18_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35620.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
AraC family transcriptional regulator
L2_019_000G1_scaffold_43_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21483..21659)
DNA (177bp) protein (59aa)
UPI00039A523B related cluster n=1 Tax=unknown RepID=UPI00039A523B
Uncharacterized protein {ECO:0000313|EMBL:ETI88301.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_019_000G1_scaffold_43_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21814..22368)
DNA (555bp) protein (185aa)
UPI0003D653F3 related cluster n=1 Tax=unknown RepID=UPI0003D653F3
Uncharacterized protein {ECO:0000313|EMBL:ETI88291.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_019_000G1_scaffold_43_21
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22310..22573)
DNA (264bp) protein (88aa)
UPI0003D6871D related cluster n=1 Tax=unknown RepID=UPI0003D6871D
Uncharacterized protein {ECO:0000313|EMBL:KJZ96626.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
AraC family transcriptional regulator
L2_019_000G1_scaffold_43_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22709..24244)
DNA (1536bp) protein (512aa)
UPI0003D5A8B4 related cluster n=1 Tax=unknown RepID=UPI0003D5A8B4
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD16434.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC transporter ATP-binding protein
L2_019_000G1_scaffold_43_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24520..24711
DNA (192bp) protein (64aa)
UPI0003D63876 related cluster n=1 Tax=unknown RepID=UPI0003D63876
Uncharacterized protein {ECO:0000313|EMBL:ETI88288.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_019_000G1_scaffold_43_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24868..25752
DNA (885bp) protein (295aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8A4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KHD16433.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
AraC family transcriptional regulator
L2_019_000G1_scaffold_43_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25864..27159
DNA (1296bp) protein (432aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBR6_9CLOT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD16432.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
L2_019_000G1_scaffold_43_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27246..28343
DNA (1098bp) protein (366aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TTJ3_THETC
Uncharacterized protein {ECO:0000313|EMBL:KHD16431.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
alpha/beta hydrolase
L2_019_000G1_scaffold_43_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28471..28743)
DNA (273bp) protein (91aa)
Putative transposase InsK for insertion sequence element IS150 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVF1_CLOSA
hypothetical protein
Putative transposase InsK for insertion sequence element IS150 {ECO:0000313|EMBL:AGX43770.1}; Uncharacterized protein {ECO:0000313|EMBL:AGX43397.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_43_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28730..28843)
DNA (114bp) protein (38aa)
Putative transposase InsK for insertion sequence element IS150 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVF1_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41957.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_43_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28892..29245)
DNA (354bp) protein (118aa)
Putative transposase InsK for insertion sequence element IS150 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVF1_CLOSA
hypothetical protein
Putative transposase InsK for insertion sequence element IS150 {ECO:0000313|EMBL:AGX43770.1}; Uncharacterized protein {ECO:0000313|EMBL:AGX43397.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_43_30
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29220..29309)
DNA (90bp) protein (30aa)
Putative transposase InsK for insertion sequence element IS150 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVF1_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41342.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Displaying items 1-30 of 152 in total

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