ggKbase home page

L2_019_000G1_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_70_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

426..1463
DNA (1038bp) protein (346aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CSP6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18190.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_019_000G1_scaffold_70_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2264..2716
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDG1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27917.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_019_000G1_scaffold_70_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3200..3895
DNA (696bp) protein (232aa)
Capsule chain length determinant protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGS7_CLOPF
Capsule chain length determinant protein {ECO:0000313|EMBL:EDS80964.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
capsule chain length determinant protein
L2_019_000G1_scaffold_70_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3909..4562
DNA (654bp) protein (218aa)
Capsular polysaccharide biosynthesis protein n=2 Tax=Clostridium perfringens RepID=Q0TTW8_CLOP1
capsular polysaccharide biosynthesis protein
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDT27904.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_019_000G1_scaffold_70_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4762..5430
DNA (669bp) protein (223aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTW7_CLOP1
capsular polysaccharide biosynthesis protein
Capsular polysaccharide biosynthsis protein {ECO:0000313|EMBL:BAB80199.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_70_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5451..6797
DNA (1347bp) protein (449aa)
NDP-sugar dehydrogenase n=1 Tax=Clostridium perfringens F262 RepID=H7CST0_CLOPF
NDP-sugar dehydrogenase {ECO:0000313|EMBL:EIA18224.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NDP-suger dehydrogenase
L2_019_000G1_scaffold_70_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6814..7860
DNA (1047bp) protein (349aa)
Probable mannose-1-phosphate guanylyltransferase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN43_CLOPE
mannose-1-phosphate guanylyltransferase
Probable mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:BAB80201.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_70_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7918..9009
DNA (1092bp) protein (364aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
GDP-mannose 4,6-dehydratase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGW7_9CLOT
GDP-mannose 4,6-dehydratase
L2_019_000G1_scaffold_70_9
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9009..10079
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FJL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG00859.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
L2_019_000G1_scaffold_70_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10097..11026
DNA (930bp) protein (310aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
GDP-L-fucose synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENK2_9CLOT
nad-dependent epimerase/dehydratase
L2_019_000G1_scaffold_70_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11036..12181
DNA (1146bp) protein (382aa)
Group 1 glycosyl transferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CM39_9CLOT
Group 1 glycosyl transferase {ECO:0000313|EMBL:EOR28256.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_019_000G1_scaffold_70_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12168..13355
DNA (1188bp) protein (396aa)
Putative transferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG45_9CLOT
Putative transferase {ECO:0000313|EMBL:EOR28258.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
glycosyl transferase family 1
L2_019_000G1_scaffold_70_13
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13359..14129
DNA (771bp) protein (257aa)
bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family (EC:2.4.1.187 2.4.1.-)
Bacterial polymer biosynthesis protein, WecB/TagA/CpsF family n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG36_9CLOT
N-acetyl-mannosamine transferase {ECO:0000313|EMBL:CEK31589.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L2_019_000G1_scaffold_70_14
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14150..14821
DNA (672bp) protein (224aa)
Hexapeptide repeat-containing protein acetyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG04_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ43756.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18.;"
L2_019_000G1_scaffold_70_15
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

14867..15691
DNA (825bp) protein (275aa)
Predicted glycosyltransferases n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BFY0_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CDD64437.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
Predicted glycosyltransferases
L2_019_000G1_scaffold_70_16
unknown

Not on your lists

15726..17027
DNA (1302bp) protein (434aa)

This feature has no annotations

L2_019_000G1_scaffold_70_17
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

17017..17976
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BF84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD64439.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
L2_019_000G1_scaffold_70_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18007..19017
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6W0_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80454.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
L2_019_000G1_scaffold_70_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19021..20550
DNA (1530bp) protein (510aa)
EpsT n=2 Tax=Clostridium butyricum RepID=B1QTB0_CLOBU
EpsT {ECO:0000313|EMBL:EEP55785.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
polysaccharide biosynthesis protein
L2_019_000G1_scaffold_70_20
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20560..21144
DNA (585bp) protein (195aa)
WfeU n=2 Tax=Enterobacteriaceae RepID=B5L3Q9_ECOLX
hexapeptide repeat of succinyl-transferase family protein
Hexapeptide repeat of succinyl-transferase family protein {ECO:0000313|EMBL:AJI21965.1}; TaxID=1348623 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium NBRC 15308 = ATCC 14581.;"
L2_019_000G1_scaffold_70_21
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21190..22197
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CFU9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70361.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L2_019_000G1_scaffold_70_22
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22187..22501
DNA (315bp) protein (105aa)
Serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441, ECO:0000313|EMBL:CBL24092.1}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441, ECO:0000313|EMBL:CBL24092.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Serine acetyltransferase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LTI4_9FIRM
L2_019_000G1_scaffold_70_23
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22582..22692
DNA (111bp) protein (37aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
Serine acetyltransferase n=1 Tax=Clostridium sp. CAG:440 RepID=R7GAT6_9CLOT
Serine acetyltransferase-like protein
L2_019_000G1_scaffold_70_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22775..23695
DNA (921bp) protein (307aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=3 Tax=Clostridium perfringens RepID=B1BGV2_CLOPF
L2_019_000G1_scaffold_70_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24065..24712
DNA (648bp) protein (216aa)
Putative RNA polymerase sigma factor n=2 Tax=Clostridium perfringens RepID=B1BGV3_CLOPF
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EDT27843.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
RNA polymerase sigma factor
L2_019_000G1_scaffold_70_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25133..27376
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16636.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_019_000G1_scaffold_70_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27454..28470
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EDT72147.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EDT72147.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V210_CLOPF
L2_019_000G1_scaffold_70_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28752..29696
DNA (945bp) protein (315aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
UTP-glucose-1-phosphate uridylyltransferase n=6 Tax=Clostridium perfringens RepID=H7CSU4_CLOPF
galF; UTP-glucose-1-phosphate uridylyltransferase
L2_019_000G1_scaffold_70_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30022..30714
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDE0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27898.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_019_000G1_scaffold_70_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31292..35137
DNA (3846bp) protein (1282aa)
Cell wall binding repeat-containing protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSU7_CLOPF
cell wall binding repeat-containing protein
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:EIA18241.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying items 1-30 of 109 in total

View Taxonomy