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L2_019_000G1_scaffold_71

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_71_1
unknown

Not on your lists

comp(466..654)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_019_000G1_scaffold_71_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(796..987)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YSE1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETI83806.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_000G1_scaffold_71_3
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1159..1581
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0Z2M6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ86389.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
transposase-like protein
L2_019_000G1_scaffold_71_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1640..2626
DNA (987bp) protein (329aa)
UPI0003D67C19 related cluster n=1 Tax=unknown RepID=UPI0003D67C19
Uncharacterized protein {ECO:0000313|EMBL:ETI83877.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative DNA methyltransferase
L2_019_000G1_scaffold_71_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2749..3363
DNA (615bp) protein (205aa)
UPI0003D5DC57 related cluster n=1 Tax=unknown RepID=UPI0003D5DC57
Conjugative transposon protein {ECO:0000313|EMBL:ETI83876.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
conjugative transposon protein
L2_019_000G1_scaffold_71_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3356..4195
DNA (840bp) protein (280aa)
UPI0003D5D98F related cluster n=1 Tax=unknown RepID=UPI0003D5D98F
Abortive infection protein {ECO:0000313|EMBL:ETI83874.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
abortive infection protein
L2_019_000G1_scaffold_71_7
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4516..4818
DNA (303bp) protein (101aa)
toxin-antitoxin system protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B5BEB6
toxin-antitoxin system protein
Toxin-antitoxin system protein {ECO:0000313|EMBL:AHU89011.1}; TaxID=1661 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes.;"
L2_019_000G1_scaffold_71_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5287..6180
DNA (894bp) protein (298aa)
UPI0003D5ADA3 related cluster n=1 Tax=unknown RepID=UPI0003D5ADA3
Uncharacterized protein {ECO:0000313|EMBL:ETI83873.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UDP-N-acetylglucosamine diphosphorylase
L2_019_000G1_scaffold_71_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6384..7769
DNA (1386bp) protein (462aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
diaminopimelate decarboxylase (EC:4.1.1.20)
UPI0003D622C0 related cluster n=1 Tax=unknown RepID=UPI0003D622C0
L2_019_000G1_scaffold_71_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7864..9159
DNA (1296bp) protein (432aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D68B0B related cluster n=1 Tax=unknown RepID=UPI0003D68B0B
homoserine dehydrogenase
L2_019_000G1_scaffold_71_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9164..10267
DNA (1104bp) protein (368aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D65C70 related cluster n=1 Tax=unknown RepID=UPI0003D65C70
L-threonine synthase
L2_019_000G1_scaffold_71_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10283..11293
DNA (1011bp) protein (337aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5D9A1 related cluster n=1 Tax=unknown RepID=UPI0003D5D9A1
homoserine kinase
L2_019_000G1_scaffold_71_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11527..13215
DNA (1689bp) protein (563aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rho; transcription termination factor Rho (EC:3.6.1.-)
UPI0003D62FCE related cluster n=1 Tax=unknown RepID=UPI0003D62FCE
L2_019_000G1_scaffold_71_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13411..14019
DNA (609bp) protein (203aa)
UPI0003D658B5 related cluster n=1 Tax=unknown RepID=UPI0003D658B5
Uncharacterized protein {ECO:0000313|EMBL:ETI83867.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_000G1_scaffold_71_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14089..17877
DNA (3789bp) protein (1263aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D640D2 related cluster n=1 Tax=unknown RepID=UPI0003D640D2
transcription-repair coupling factor
L2_019_000G1_scaffold_71_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17937..18641
DNA (705bp) protein (235aa)
UPI0003D60429 related cluster n=1 Tax=unknown RepID=UPI0003D60429
Uncharacterized protein {ECO:0000313|EMBL:ETI83865.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_000G1_scaffold_71_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18755..20035
DNA (1281bp) protein (427aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
enolase (EC:4.2.1.11)
UPI0003D5FA91 related cluster n=1 Tax=unknown RepID=UPI0003D5FA91
L2_019_000G1_scaffold_71_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20503..23322
DNA (2820bp) protein (940aa)
nedA; sialidase (EC:3.2.1.18)
UPI0003D62086 related cluster n=1 Tax=unknown RepID=UPI0003D62086
Uncharacterized protein {ECO:0000313|EMBL:ETI83863.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_000G1_scaffold_71_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23319..24287
DNA (969bp) protein (323aa)
UPI0003D61CF5 related cluster n=1 Tax=unknown RepID=UPI0003D61CF5
Uncharacterized protein {ECO:0000313|EMBL:ETI83862.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_000G1_scaffold_71_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24319..27942
DNA (3624bp) protein (1208aa)
UPI0003D5D8E9 related cluster n=1 Tax=unknown RepID=UPI0003D5D8E9
Uncharacterized protein {ECO:0000313|EMBL:ETI83861.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_000G1_scaffold_71_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28015..28623
DNA (609bp) protein (203aa)
UPI0003D5BE4D related cluster n=1 Tax=unknown RepID=UPI0003D5BE4D
Uncharacterized protein {ECO:0000313|EMBL:ETI83860.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
septum formation initiator
L2_019_000G1_scaffold_71_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28620..29147
DNA (528bp) protein (176aa)
UPI0003D5FA80 related cluster n=1 Tax=unknown RepID=UPI0003D5FA80
Septum formation initiator family protein {ECO:0000313|EMBL:ETI83859.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_000G1_scaffold_71_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29277..30275
DNA (999bp) protein (333aa)
UPI0003D65D76 related cluster n=1 Tax=unknown RepID=UPI0003D65D76
Uncharacterized protein {ECO:0000313|EMBL:ETI83858.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
exopolyphosphatase (ppx)
L2_019_000G1_scaffold_71_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30343..32112)
DNA (1770bp) protein (590aa)
UPI0003D68417 related cluster n=1 Tax=unknown RepID=UPI0003D68417
Uncharacterized protein {ECO:0000313|EMBL:ETI83857.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
dolichyl-phosphate-mannose-mannosyltransferase
L2_019_000G1_scaffold_71_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32117..32971
DNA (855bp) protein (285aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D63E7B related cluster n=1 Tax=unknown RepID=UPI0003D63E7B
putative methyltransferase
L2_019_000G1_scaffold_71_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


33024..34826
DNA (1803bp) protein (601aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5FA00 related cluster n=1 Tax=unknown RepID=UPI0003D5FA00
methionyl-tRNA synthetase
L2_019_000G1_scaffold_71_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34853..36424
DNA (1572bp) protein (524aa)
UPI0003D6062E related cluster n=1 Tax=unknown RepID=UPI0003D6062E
Uncharacterized protein {ECO:0000313|EMBL:ETI83854.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative sialidase
L2_019_000G1_scaffold_71_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36446..39082
DNA (2637bp) protein (879aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D60776 related cluster n=1 Tax=unknown RepID=UPI0003D60776
ATP-dependent DNA helicase PcrA
L2_019_000G1_scaffold_71_29
Mobiluncus mulieris, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39219..40217)
DNA (999bp) protein (333aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=866770 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus mulieris FB024-16.;"
malate dehydrogenase (EC:1.1.1.82)
malate dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B70E2E
L2_019_000G1_scaffold_71_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40472..40909)
DNA (438bp) protein (146aa)
UPI0003D5B6FD related cluster n=1 Tax=unknown RepID=UPI0003D5B6FD
GtrA family protein {ECO:0000313|EMBL:ETI83851.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
GtrA family protein
Displaying items 1-30 of 98 in total

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