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L2_019_000G1_scaffold_77

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_77_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..295
DNA (294bp) protein (98aa)
Galactoside-symporter n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=Q0ZII8_BIFBI
lacS; galactoside symporter
Galactoside symporter {ECO:0000313|EMBL:ADO53610.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_77_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

649..1524
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2CFQ3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI43780.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
transcriptional regulator
L2_019_000G1_scaffold_77_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1610..2521)
DNA (912bp) protein (304aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJG3_BIFBI
trmB; tRNA (guanine-N(7)-)-methyl transferase
L2_019_000G1_scaffold_77_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2715..3728
DNA (1014bp) protein (338aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=2 Tax=Bifidobacterium bifidum RepID=E4VBY0_BIFBI
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ERI83378.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_019_000G1_scaffold_77_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4022..4729
DNA (708bp) protein (236aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=K2M5J7_BIFBI
hypothetical protein
Membrane spanning protein {ECO:0000313|EMBL:KFI43777.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_019_000G1_scaffold_77_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6094..7245
DNA (1152bp) protein (384aa)
Lactaldehyde reductase n=7 Tax=Bifidobacterium RepID=E3EQE6_BIFBS
fucO; Lactaldehyde reductase
L-1,2-propanediol oxidoreductase {ECO:0000313|EMBL:BAQ98657.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_019_000G1_scaffold_77_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7416..8315)
DNA (900bp) protein (300aa)
Glycosyltransferase, group 2 family protein n=4 Tax=Bifidobacterium bifidum RepID=U2DP74_BIFBI
putative glycosyl transferase
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERI83382.1}; Putative glycosyltransferase {ECO:0000313|EMBL:BAQ98656.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_019_000G1_scaffold_77_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8369..9973
DNA (1605bp) protein (535aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2M2U9_BIFBI
Conserved hypothetical membrane protein {ECO:0000313|EMBL:AFL05019.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
hypothetical protein
L2_019_000G1_scaffold_77_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9973..11196
DNA (1224bp) protein (408aa)
N-acetylglucosaminyltransferase n=7 Tax=Bifidobacterium RepID=E3EQE3_BIFBS
pgaC; biofilm PGA synthesis N-glycosyl transferase
Biofilm PGA synthesis N-glycosyl transferase {ECO:0000313|EMBL:EKF16335.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_019_000G1_scaffold_77_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11335..12264
DNA (930bp) protein (310aa)
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:KFI43772.1}; EC=3.6.3.25 {ECO:0000313|EMBL:KFI43772.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ABC type transport system, ATP-binding protein n=7 Tax=Bifidobacterium bifidum RepID=E3EQE2_BIFBS
ABC transporter ATP-binding protein
L2_019_000G1_scaffold_77_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12264..13919
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DUC2_BIFBI
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:KFI43771.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ABC transporter permease
L2_019_000G1_scaffold_77_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14026..15441
DNA (1416bp) protein (472aa)
D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein) {ECO:0000313|EMBL:KFI43770.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KFI43770.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
d-alanyl-d-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DP79_BIFBI
L2_019_000G1_scaffold_77_13
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15454..16572
DNA (1119bp) protein (373aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
tRNA(Ile)-lysidine synthase n=2 Tax=Bifidobacterium RepID=R6GJX0_9BIFI
tilS; tRNA(Ile)-lysidine synthase
L2_019_000G1_scaffold_77_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16550..17116
DNA (567bp) protein (189aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EFR51105.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EFR51105.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hpt; hypoxanthine phosphoribosyl transferase (EC:2.4.2.8)
Hypoxanthine-guanine phosphoribosyltransferase n=8 Tax=Bifidobacterium RepID=E3EQD8_BIFBS
L2_019_000G1_scaffold_77_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17150..19216
DNA (2067bp) protein (689aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
ATP-dependent zinc metalloprotease FtsH n=5 Tax=Bifidobacterium RepID=I3WJE9_BIFBI
ftsH; cell division protease
L2_019_000G1_scaffold_77_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19357..19923
DNA (567bp) protein (189aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
GTP cyclohydrolase 1 n=8 Tax=Bifidobacterium RepID=E3EQD6_BIFBS
L2_019_000G1_scaffold_77_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19989..20861
DNA (873bp) protein (291aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Dihydropteroate synthase n=3 Tax=Bifidobacterium RepID=E3EQD5_BIFBS
folP; dihydropteroate synthase
L2_019_000G1_scaffold_77_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20944..22458
DNA (1515bp) protein (505aa)
sulD; dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:4.1.2.25)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=4 Tax=Bifidobacterium bifidum RepID=E3EQD4_BIFBS
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ADO53590.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_77_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22455..22994
DNA (540bp) protein (180aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=E4VBZ5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83394.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_019_000G1_scaffold_77_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23501..24445)
DNA (945bp) protein (315aa)
Acyl-CoA thioesterase n=4 Tax=Bifidobacterium RepID=K2HA86_BIFBI
Putative acyl-CoA thioesterase II {ECO:0000313|EMBL:EFR51111.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
tesB; acyl-CoA thioesterase
L2_019_000G1_scaffold_77_21
unknown

Not on your lists

comp(24466..24639)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_019_000G1_scaffold_77_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24789..28127
DNA (3339bp) protein (1113aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQD1_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53587.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_77_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28331..30010)
DNA (1680bp) protein (560aa)
ABC transporter ATP-binding protein (EC:3.6.3.19)
ATP-binding protein of ABC transporter system n=7 Tax=Bifidobacterium RepID=E4NYE4_BIFBP
ATPase component of ABC transporter {ECO:0000313|EMBL:AFL05004.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_000G1_scaffold_77_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30283..30621
DNA (339bp) protein (113aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=K2HTW1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ98630.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_019_000G1_scaffold_77_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30717..31370
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJE0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL05003.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_000G1_scaffold_77_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31521..32198)
DNA (678bp) protein (226aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E4VC02_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53583.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_77_27
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32289..32843)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H6J0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB21902.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_000G1_scaffold_77_28
unknown

Not on your lists

32964..33470
DNA (507bp) protein (169aa)

This feature has no annotations

L2_019_000G1_scaffold_77_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33467..34114)
DNA (648bp) protein (216aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
pyrrolidone-carboxylate peptidase Pcp (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=2 Tax=Bifidobacterium bifidum RepID=K2IQ76_BIFBI
L2_019_000G1_scaffold_77_30
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34155..34427)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GJY2_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB21904.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Displaying items 1-30 of 97 in total

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