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L2_019_000G1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_88_1
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82..1581)
DNA (1500bp) protein (500aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAP8_9FIRM
L2_019_000G1_scaffold_88_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1601..2083)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDX2_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
transcription elongation factor GreA
L2_019_000G1_scaffold_88_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2172..3143)
DNA (972bp) protein (324aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
tRNA-dihydrouridine synthase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBP9_9FIRM
hypothetical protein
L2_019_000G1_scaffold_88_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3161..3490)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36394.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_88_5
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3477..4472)
DNA (996bp) protein (332aa)
Biotin-[acetyl-CoA-carboxylase] ligase / BirA family transcriptional regulator biotin operon repressor n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAJ3_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
BirA family transcriptional regulator
L2_019_000G1_scaffold_88_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4591..4875)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36396.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_88_7
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4901..5893)
DNA (993bp) protein (331aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Ornithine carbamoyltransferase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDX7_9FIRM
ornithine carbamoyltransferase
L2_019_000G1_scaffold_88_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5936..6709)
DNA (774bp) protein (258aa)
Methyl-accepting chemotaxis protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBQ4_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDE36398.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
methyl-accepting chemotaxis protein
L2_019_000G1_scaffold_88_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6919..7881)
DNA (963bp) protein (321aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9Q2_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDE36399.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
N-acetylmuramoyl-L-alanine amidase
L2_019_000G1_scaffold_88_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8321..9106)
DNA (786bp) protein (262aa)
RNA methyltransferase TrmH family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAJ7_9FIRM
RNA methyltransferase TrmH family {ECO:0000313|EMBL:CDE36400.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
TrmH family RNA methyltransferase
L2_019_000G1_scaffold_88_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9128..10126)
DNA (999bp) protein (333aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
6-phosphofructokinase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAQ8_9FIRM
6-phosphofructokinase
L2_019_000G1_scaffold_88_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10224..13697)
DNA (3474bp) protein (1158aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDY2_9FIRM
dnaE; DNA polymerase III DnaE
L2_019_000G1_scaffold_88_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14205..14927)
DNA (723bp) protein (241aa)
Colicin V production protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBQ8_9FIRM
Colicin V production protein {ECO:0000313|EMBL:CDE36403.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Colicin V production protein.
L2_019_000G1_scaffold_88_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15088..17190)
DNA (2103bp) protein (701aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9Q7_9FIRM
microtubule-severing ATPase
L2_019_000G1_scaffold_88_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17487..18239
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36405.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_88_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18332..18865
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36406.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_88_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19148..20761)
DNA (1614bp) protein (538aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
CTP synthase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDY6_9FIRM
pyrG; CTP synthetase
L2_019_000G1_scaffold_88_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20916..22661)
DNA (1746bp) protein (582aa)
ATP-binding cassette subfamily B bacterial n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBR2_9FIRM
ATP-binding cassette subfamily B bacterial {ECO:0000313|EMBL:CDE36408.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ATP-binding cassette subfamily B protein
L2_019_000G1_scaffold_88_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22665..24392)
DNA (1728bp) protein (576aa)
ATP-binding cassette subfamily C bacterial n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9R1_9FIRM
ATP-binding cassette subfamily C bacterial {ECO:0000313|EMBL:CDE36409.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ATP-binding cassette subfamily C protein
L2_019_000G1_scaffold_88_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24560..25486
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36410.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
LysR family transcriptional regulator
L2_019_000G1_scaffold_88_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25446..26627)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36411.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_88_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26965..28497
DNA (1533bp) protein (511aa)
Polar amino acid transport system permease protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDZ2_9FIRM
Polar amino acid transport system permease protein {ECO:0000313|EMBL:CDE36412.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
polar amino acid transport system permease
L2_019_000G1_scaffold_88_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28484..29230
DNA (747bp) protein (249aa)
Polar amino acid transport system ATP-binding protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBR8_9FIRM
Polar amino acid transport system ATP-binding protein {ECO:0000313|EMBL:CDE36413.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
polar amino acid transport system ATP-binding protein
L2_019_000G1_scaffold_88_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29284..29496)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36416.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_88_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29526..29747)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36417.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_88_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29839..30051)
DNA (213bp) protein (71aa)
Cytidylate kinase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBS2_9FIRM
Cytidylate kinase {ECO:0000313|EMBL:CDE36418.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
cytidylate kinase
L2_019_000G1_scaffold_88_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30065..31432)
DNA (1368bp) protein (456aa)
Multidrug resistance protein MATE family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9S1_9FIRM
Multidrug resistance protein MATE family {ECO:0000313|EMBL:CDE36419.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
MATE family multidrug resistance protein
L2_019_000G1_scaffold_88_28
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31789..32373)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IMA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE52651.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
L-2-amino-thiazoline-4-carboxylic acid hydrolase
L2_019_000G1_scaffold_88_29
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32493..34223)
DNA (1731bp) protein (577aa)
Heavy metal transport/detoxification protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LBZ7_9FIRM
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:CDB81024.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
heavy metal transport/detoxification protein
L2_019_000G1_scaffold_88_30
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(34734..35273)
DNA (540bp) protein (180aa)
Uncharacterized protein n=3 Tax=Treponema denticola RepID=M2BM02_TREDN
Uncharacterized protein {ECO:0000313|EMBL:EPF38879.1}; TaxID=999435 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola SP23.;"
hypothetical protein
Displaying items 1-30 of 107 in total

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