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L2_019_000G1_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_112_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(455..2515)
DNA (2061bp) protein (687aa)
CAAX amino terminal protease family protein n=49 Tax=Clostridium difficile RepID=G6BTV9_CLODI
CAAX protease self-immunity family protein {ECO:0000313|EMBL:EQE65745.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
ABC-type transport system, permease
L2_019_000G1_scaffold_112_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2516..3310)
DNA (795bp) protein (265aa)
ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CCL21759.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL21759.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC transporter family protein n=151 Tax=Clostridium difficile RepID=T2UR85_CLODI
sodium extrusion ABC transporter ATP-binding protein
L2_019_000G1_scaffold_112_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3563..4480
DNA (918bp) protein (306aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T3JGD1_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29813.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_019_000G1_scaffold_112_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4622..5803)
DNA (1182bp) protein (394aa)
Amidohydrolase family protein n=165 Tax=Clostridium difficile RepID=T3H5A9_CLODC
putative amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:CCL21757.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_019_000G1_scaffold_112_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6169..7437)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=136 Tax=Clostridium difficile RepID=G6BTW3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL21756.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
conserved hypothetical protein
L2_019_000G1_scaffold_112_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7448..8260)
DNA (813bp) protein (271aa)
ABC-2 transporter family protein n=40 Tax=Clostridium difficile RepID=T2V8T9_CLODI
conserved hypothetical protein
ABC-2 transporter family protein {ECO:0000313|EMBL:EQE65875.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_112_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8269..9468)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=33 Tax=Clostridium difficile RepID=T2VC82_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI00026.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
conserved hypothetical protein
L2_019_000G1_scaffold_112_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9480..10304)
DNA (825bp) protein (275aa)
ABC-type transport system, multidrug-family permease n=46 Tax=Clostridium difficile RepID=U3YUS4_CLODI
ABC-type transport system, multidrug-familypermease
Putative membrane protein {ECO:0000313|EMBL:EQE65906.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_112_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10297..11013)
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKH08202.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH08202.1};; ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CDS86833.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDS86833.1};; ABC-type transport system, multidrug-familyATP-binding protein {ECO:0000313|EMBL:CEJ98199.1}; EC=3.6.3.- {ECO:0000313|EMBL:CEJ98199.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ABC transporter, ATP-binding protein n=175 Tax=Clostridium difficile RepID=C9XP50_CLODC
ABC transporter ATP-binding protein
L2_019_000G1_scaffold_112_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11085..11441)
DNA (357bp) protein (119aa)
Bacterial regulatory s, gntR family protein n=188 Tax=Clostridium difficile RepID=C9XP49_CLODC
GntR family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EQG76008.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_019_000G1_scaffold_112_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11797..12255
DNA (459bp) protein (153aa)
GyrI-like small molecule binding domain protein n=147 Tax=Clostridium difficile RepID=T3H8Q9_CLODC
hypothetical protein
GyrI-like small molecule binding domain protein {ECO:0000313|EMBL:EQE65865.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_112_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12259..13221
DNA (963bp) protein (321aa)
multidrug family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=114 Tax=Clostridium difficile RepID=T3HAW4_CLODC
ABC transporter family protein {ECO:0000313|EMBL:EQI00021.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_019_000G1_scaffold_112_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13215..13964
DNA (750bp) protein (250aa)
ABC transporter, permease protein n=105 Tax=Clostridium difficile RepID=C9XMJ5_CLODC
ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_019_000G1_scaffold_112_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14030..14332)
DNA (303bp) protein (101aa)
Lichenan-specific phosphotransferase enzyme IIB component n=153 Tax=Clostridium difficile RepID=T3H5R4_CLODC
PTS system, lactose/cellobiose-family IIBcomponent
PTS system, lactose/cellobiose-family IIB component {ECO:0000313|EMBL:CCL21747.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_019_000G1_scaffold_112_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14471..15103)
DNA (633bp) protein (211aa)
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Thiamine-phosphate synthase n=133 Tax=Clostridium difficile RepID=THIE_CLOD6
L2_019_000G1_scaffold_112_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15126..15914)
DNA (789bp) protein (263aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
thiM; hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=98 Tax=Clostridium difficile RepID=T2TKV4_CLODI
L2_019_000G1_scaffold_112_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15938..16732)
DNA (795bp) protein (265aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CCL21744.1}; EC=2.7.4.7 {ECO:0000313|EMBL:CCL21744.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Phosphomethylpyrimidine kinase n=175 Tax=Clostridium difficile RepID=C9XMJ1_CLODC
thiD; phosphomethylpyrimidine kinase
L2_019_000G1_scaffold_112_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17017..17328)
DNA (312bp) protein (104aa)
Uncharacterized protein n=187 Tax=Clostridium difficile RepID=T2U194_CLODI
endonuclease
Uncharacterized protein {ECO:0000313|EMBL:EQI85077.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L2_019_000G1_scaffold_112_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17613..18863
DNA (1251bp) protein (417aa)
Uncharacterized protein n=43 Tax=Clostridium difficile RepID=T3JLA5_CLODI
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68462.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_019_000G1_scaffold_112_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19060..19929
DNA (870bp) protein (290aa)
map2; Methionine aminopeptidase Map2 (MAP) (PeptidaseM) (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Methionine aminopeptidase n=52 Tax=Clostridium difficile RepID=T2URG3_CLODI
L2_019_000G1_scaffold_112_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19983..20171)
DNA (189bp) protein (63aa)
Ferredoxin n=212 Tax=Clostridium difficile RepID=T3H5X5_CLODC
Ferredoxin
Ferredoxin {ECO:0000313|EMBL:CCL21740.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_019_000G1_scaffold_112_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20331..20921)
DNA (591bp) protein (197aa)
cysE; Serine acetyltransferase (SAT) (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Serine acetyltransferase n=200 Tax=Clostridium difficile RepID=T3H7G6_CLODC
L2_019_000G1_scaffold_112_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20948..21856)
DNA (909bp) protein (303aa)
O-acetyl-serine thiol-lyase A (O-acetyl-sulfhydrylase)(OAS-TL) {ECO:0000313|EMBL:CCL21738.1}; EC=2.5.1.47 {ECO:0000313|EMBL:CCL21738.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Cysteine synthase A n=170 Tax=Clostridium difficile RepID=C9XKX8_CLODC
putative O-acetylserine sulfhydrylase
L2_019_000G1_scaffold_112_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22093..22719)
DNA (627bp) protein (209aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
kdpC; Potassium-transporting ATPase C chain (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=44 Tax=Clostridium difficile RepID=T2V8P1_CLODI
L2_019_000G1_scaffold_112_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22738..24795)
DNA (2058bp) protein (686aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
kdpB; Potassium-transporting ATPase B chain (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=193 Tax=Clostridium difficile RepID=Q186E6_CLOD6
L2_019_000G1_scaffold_112_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24820..26496)
DNA (1677bp) protein (559aa)
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Potassium-transporting ATPase A chain n=3 Tax=Clostridium difficile RepID=T3WBW2_CLODI
L2_019_000G1_scaffold_112_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26644..26739)
DNA (96bp) protein (32aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=U3UP29_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK90404.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
L2_019_000G1_scaffold_112_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27046..27678)
DNA (633bp) protein (211aa)
Uncharacterized protein n=198 Tax=Clostridium difficile RepID=D5Q6Q9_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCK97924.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L2_019_000G1_scaffold_112_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28050..29012)
DNA (963bp) protein (321aa)
Periplasmic binding s and sugar binding domain of LacI family protein n=137 Tax=Clostridium difficile RepID=C9XJB6_CLODC
ribose ABC transporter substrate-binding protein
ABC-type transport system, sugar-family extracellular solute-binding protein {ECO:0000313|EMBL:CDS87122.1}; ABC-type transport system, sugar-familyextracellular solute-binding protein {ECO:0000313|EMBL:CEJ98180.1}; Putative ribose ABC transporter, substrate-binding lipoprotein {ECO:0000313|EMBL:CDS86814.1}; Ribose ABC transporter substrate-binding protein {ECO:0000313|EMBL:CKH07618.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_019_000G1_scaffold_112_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29033..29983)
DNA (951bp) protein (317aa)
Branched-chain amino acid transport system / permease component family protein n=46 Tax=Clostridium difficile RepID=T2V8S5_CLODI
ribose ABC transporter permease
Putative ribose ABC transporter permease protein {ECO:0000313|EMBL:EHJ25012.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
Displaying items 1-30 of 94 in total

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