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L2_019_000G1_scaffold_208

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_208_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(283..2805)
DNA (2523bp) protein (841aa)
Protein translocase subunit SecA n=4 Tax=Clostridium perfringens RepID=SECA_CLOP1
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
secA; preprotein translocase subunit SecA
L2_019_000G1_scaffold_208_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3041..3580)
DNA (540bp) protein (180aa)
Ribosomal subunit interface protein n=8 Tax=Clostridium perfringens RepID=H7CYJ6_CLOPF
raiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIA16374.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_000G1_scaffold_208_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4032..4691)
DNA (660bp) protein (220aa)
ComF protein, homolog n=2 Tax=Clostridium perfringens RepID=Q0TND8_CLOP1
competence protein FC
ComF protein, homolog {ECO:0000313|EMBL:EDT23929.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_019_000G1_scaffold_208_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4667..5629)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIE7_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81880.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_208_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5647..7881)
DNA (2235bp) protein (745aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Helicase, RecD/TraA family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRV0_CLOPF
recD; RecD/TraA family helicase
L2_019_000G1_scaffold_208_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8018..9154
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=3 Tax=Clostridium perfringens RepID=B1BKB9_CLOPF
L2_019_000G1_scaffold_208_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9291..10466)
DNA (1176bp) protein (392aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
S-adenosylmethionine synthase n=9 Tax=Clostridium perfringens RepID=METK_CLOP1
L2_019_000G1_scaffold_208_8
unknown

Not on your lists

10987..11574
DNA (588bp) protein (196aa)

This feature has no annotations

L2_019_000G1_scaffold_208_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11685..12329)
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BKB6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15602.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_019_000G1_scaffold_208_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12435..12965
DNA (531bp) protein (177aa)
Putative sporulation protein YyaC n=3 Tax=Clostridium perfringens RepID=H7CYK3_CLOPF
Putative sporulation protein YyaC {ECO:0000313|EMBL:EIA16185.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
yyaC; sporulation protein YyaC
L2_019_000G1_scaffold_208_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13004..14041)
DNA (1038bp) protein (346aa)
Rod shape-determining protein Mbl n=9 Tax=Clostridium perfringens RepID=H7CYK4_CLOPF
mbl; rod shape-determining protein Mbl
Mbl protein {ECO:0000313|EMBL:EDT15625.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_019_000G1_scaffold_208_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14102..14383)
DNA (282bp) protein (94aa)
Stage III sporulation protein D n=11 Tax=Clostridium perfringens RepID=H7CYK5_CLOPF
spoIIID; stage III sporulation protein D
Stage III sporulation protein D {ECO:0000313|EMBL:EDT15573.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_019_000G1_scaffold_208_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14458..15228)
DNA (771bp) protein (257aa)
Putative peptidase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UYS1_CLOPF
Putative peptidase {ECO:0000313|EMBL:EDT73304.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
peptidase
L2_019_000G1_scaffold_208_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15339..16361)
DNA (1023bp) protein (341aa)
Stage II sporulation protein D n=2 Tax=Clostridium perfringens RepID=B1RGF0_CLOPF
Stage II sporulation protein D {ECO:0000313|EMBL:EDT26989.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
spoIID; stage II sporulation protein D
L2_019_000G1_scaffold_208_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16473..17738)
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium perfringens F262 RepID=H7CYK8_CLOPF
L2_019_000G1_scaffold_208_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17761..18405)
DNA (645bp) protein (215aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XID6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15642.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_019_000G1_scaffold_208_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18587..18988)
DNA (402bp) protein (134aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=9 Tax=Clostridium perfringens RepID=ATPE_CLOP1
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_000G1_scaffold_208_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19004..20401)
DNA (1398bp) protein (466aa)
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ATP synthase subunit beta n=10 Tax=Clostridium perfringens RepID=ATPB_CLOP1
L2_019_000G1_scaffold_208_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20415..21266)
DNA (852bp) protein (284aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=11 Tax=Clostridium perfringens RepID=ATPG_CLOP1
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_019_000G1_scaffold_208_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21331..22839)
DNA (1509bp) protein (503aa)
atpA; ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ATP synthase subunit alpha n=9 Tax=Clostridium perfringens RepID=ATPA_CLOP1
L2_019_000G1_scaffold_208_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22850..23389)
DNA (540bp) protein (180aa)
atpH; ATP synthase F0F1 subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=2 Tax=Clostridium perfringens RepID=B1BKA2_CLOPF
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_019_000G1_scaffold_208_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23392..23871)
DNA (480bp) protein (160aa)
atpF; ATP synthase F0F1 subunit B (EC:3.6.3.14)
ATP synthase subunit b n=10 Tax=Clostridium perfringens RepID=ATPF_CLOP1
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_000G1_scaffold_208_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23971..24189)
DNA (219bp) protein (73aa)
ATP synthase subunit c n=10 Tax=Clostridium perfringens RepID=ATPL_CLOP1
atpL; ATP synthase F0F1 subunit C
ATP synthase subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; ATP synthase F(0) sector subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; F-type ATPase subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; Short=F-ATPase subunit c {ECO:0000255|HAMAP-Rule:MF_01396};; Lipid-binding protein {ECO:0000255|HAMAP-Rule:MF_01396}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
L2_019_000G1_scaffold_208_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24250..24924)
DNA (675bp) protein (225aa)
atpB; ATP synthase F0F1 subunit A (EC:3.6.3.14)
ATP synthase subunit a n=10 Tax=Clostridium perfringens RepID=H7CYL7_CLOPF
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_019_000G1_scaffold_208_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24990..25346)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CYL8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16200.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_000G1_scaffold_208_26
unknown

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comp(25322..25477)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_019_000G1_scaffold_208_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26029..27207)
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=2 Tax=Clostridium perfringens RepID=B1RLY1_CLOPF
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EDT73234.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_019_000G1_scaffold_208_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27475..28629)
DNA (1155bp) protein (385aa)
mnaA; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EDT23965.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EDT23965.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
UDP-N-acetylglucosamine 2-epimerase n=8 Tax=Clostridium perfringens RepID=H7CYM0_CLOPF
L2_019_000G1_scaffold_208_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28693..29322)
DNA (630bp) protein (210aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Uracil phosphoribosyltransferase n=10 Tax=Clostridium perfringens RepID=UPP_CLOP1
L2_019_000G1_scaffold_208_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29367..29816)
DNA (450bp) protein (150aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=8 Tax=Clostridium perfringens RepID=H7CYM2_CLOPF
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:BAB81904.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Displaying items 1-30 of 72 in total

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