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L2_019_000G1_scaffold_215

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_215_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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192..1160
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68015.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Glycosyltransferases involved in cell wall biogenesis
L2_019_000G1_scaffold_215_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1144..3798
DNA (2655bp) protein (885aa)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=A7B8N9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20213.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_019_000G1_scaffold_215_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3727..4875)
DNA (1149bp) protein (383aa)
glycerate kinase (EC:2.7.1.31)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYL9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20214.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_019_000G1_scaffold_215_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4912..6303)
DNA (1392bp) protein (464aa)
GntP family permease n=3 Tax=Lachnospiraceae RepID=A7B8N6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20215.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
gluconate transporter
L2_019_000G1_scaffold_215_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6433..7551)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B8N5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48463.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
CdaR family transcriptional regulator
L2_019_000G1_scaffold_215_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7725..9179
DNA (1455bp) protein (485aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZH1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48462.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
flotillin
L2_019_000G1_scaffold_215_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9346..10764
DNA (1419bp) protein (473aa)
MATE efflux family protein n=2 Tax=Lachnospiraceae RepID=A7B8N3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48461.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative efflux protein, MATE family
L2_019_000G1_scaffold_215_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10818..11579
DNA (762bp) protein (254aa)
Methyltransferase domain protein n=3 Tax=Lachnospiraceae RepID=A7B8N2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48460.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
type 11 methyltransferase
L2_019_000G1_scaffold_215_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11794..12255
DNA (462bp) protein (154aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B8N0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48459.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
peptidase S8 and S53 subtilisin kexin sedolisin
L2_019_000G1_scaffold_215_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12948..14813
DNA (1866bp) protein (622aa)
Radical SAM domain protein n=3 Tax=Lachnospiraceae RepID=A7B8M8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20222.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Fe-S oxidoreductase
L2_019_000G1_scaffold_215_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14797..15501
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66608.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_019_000G1_scaffold_215_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15547..16788
DNA (1242bp) protein (414aa)
Ribonucleases G and E (EC:3.1.26.-)
Ribonuclease, Rne/Rng family n=2 Tax=Ruminococcus gnavus RepID=A7B8M6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20224.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_019_000G1_scaffold_215_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16781..17260
DNA (480bp) protein (160aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8M5_RUMGN
ybaK/ebsC protein
L2_019_000G1_scaffold_215_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17408..18727
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=4 Tax=Clostridiales RepID=F7JVY0_9FIRM
L2_019_000G1_scaffold_215_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18744..19157
DNA (414bp) protein (138aa)
CBS domain protein n=4 Tax=Clostridiales RepID=A7B306_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48452.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
FOG: CBS domain
L2_019_000G1_scaffold_215_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19302..19610
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=4 Tax=Clostridiales RepID=A7B305_RUMGN
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
LSU ribosomal protein L21P
L2_019_000G1_scaffold_215_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19619..19951
DNA (333bp) protein (111aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B304_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48450.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted ribosomal protein
L2_019_000G1_scaffold_215_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19957..20241
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=4 Tax=Clostridiales RepID=A7B303_RUMGN
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
LSU ribosomal protein L27P
L2_019_000G1_scaffold_215_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20352..21635
DNA (1284bp) protein (428aa)
GTPase Obg n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLP0_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Obg family GTPase CgtA
L2_019_000G1_scaffold_215_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21668..21958
DNA (291bp) protein (97aa)
RNA-binding protein, YhbY family n=4 Tax=Clostridiales RepID=A7B300_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66599.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
conserved hypothetical protein TIGR00253
L2_019_000G1_scaffold_215_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21968..22591
DNA (624bp) protein (208aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Nicotinate (Nicotinamide) nucleotide adenylyltransferase n=4 Tax=Clostridiales RepID=V8BYI9_RUMGN
hypothetical protein
L2_019_000G1_scaffold_215_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22588..23172
DNA (585bp) protein (195aa)
Hydrolase, HD family n=4 Tax=Clostridiales RepID=A7B2Z8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48445.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical protein TIGR00488
L2_019_000G1_scaffold_215_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23208..23558
DNA (351bp) protein (117aa)
Ribosomal silencing factor RsfS n=4 Tax=Clostridiales RepID=A7B2Z7_RUMGN
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
iojap-related protein
L2_019_000G1_scaffold_215_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23642..24259)
DNA (618bp) protein (206aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor n=4 Tax=Clostridiales RepID=A7B2Z6_RUMGN
L2_019_000G1_scaffold_215_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24470..26209
DNA (1740bp) protein (580aa)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7B2Z5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48442.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L2_019_000G1_scaffold_215_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26202..28004
DNA (1803bp) protein (601aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYJ5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48441.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L2_019_000G1_scaffold_215_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28126..28443
DNA (318bp) protein (106aa)
LysM domain protein n=4 Tax=Clostridiales RepID=A7B2Z3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48440.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
peptidoglycan-binding lysin domain-containing protein
L2_019_000G1_scaffold_215_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28648..28893
DNA (246bp) protein (82aa)
2Fe-2S iron-sulfur cluster binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B2Z1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48439.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterized metal-binding protein
L2_019_000G1_scaffold_215_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29108..30184
DNA (1077bp) protein (359aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8C0G6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20241.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Site-specific recombinase XerD
L2_019_000G1_scaffold_215_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30214..31209
DNA (996bp) protein (332aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B2Y7_RUMGN
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDN77760.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Displaying items 1-30 of 73 in total

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