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L2_019_000G1_scaffold_278

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_278_1
unknown

Not on your lists

comp(76..774)
DNA (699bp) protein (233aa)

This feature has no annotations

L2_019_000G1_scaffold_278_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1668..2510)
DNA (843bp) protein (281aa)
Hydrolase (HAD superfamily) n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENC4_BIFBS
hydrolase
Hydrolase (HAD superfamily) {ECO:0000313|EMBL:ADO53857.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_278_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2643..3929)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=K2HUI6_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE51153.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_019_000G1_scaffold_278_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3933..4427)
DNA (495bp) protein (165aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=I3WK89_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI44021.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_019_000G1_scaffold_278_5
unknown

Not on your lists

4516..4857
DNA (342bp) protein (114aa)

This feature has no annotations

L2_019_000G1_scaffold_278_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4752..6185)
DNA (1434bp) protein (478aa)
6-phospho-beta-glucosidase BglA n=2 Tax=Bifidobacterium RepID=K2IQU4_BIFBI
6-phospho-beta-glucosidase BglA {ECO:0000313|EMBL:EKE51150.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
bglA; 6-phospho-beta-glucosidase
L2_019_000G1_scaffold_278_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6247..6576)
DNA (330bp) protein (110aa)
PTS system, cellobiose-specific IIA component n=5 Tax=Bifidobacterium bifidum RepID=E3EQH9_BIFBS
licA; lichenan-specific phospho transferase enzyme IIA component
PTS system, cellobiose-specific IIA component {ECO:0000313|EMBL:ADO53863.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_278_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6724..7023)
DNA (300bp) protein (100aa)
chbB; N, N'-diacetylchitobiose-specificphospho transferase enzyme IIB component (EC:2.7.1.69)
N, N'-diacetylchitobiose-specificphospho transferase enzyme IIB component {ECO:0000313|EMBL:AFL05306.1}; EC=2.7.1.69 {ECO:0000313|EMBL:AFL05306.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
N, N'-diacetylchitobiose-specificphospho transferase enzyme IIB component n=4 Tax=Bifidobacterium bifidum RepID=I3WK93_BIFBI
L2_019_000G1_scaffold_278_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7154..8494)
DNA (1341bp) protein (447aa)
Lichenan permease IIC component n=3 Tax=Bifidobacterium bifidum RepID=I3WK94_BIFBI
licC; lichenan permease IIC component
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_000G1_scaffold_278_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8780..9199)
DNA (420bp) protein (140aa)
hydrolase (EC:5.2.1.8)
Hydrolase n=2 Tax=Bifidobacterium RepID=K2HAW6_BIFBI
Hydrolase {ECO:0000313|EMBL:EKE51146.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_019_000G1_scaffold_278_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9270..9407)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DSK6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82701.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hydrolase
L2_019_000G1_scaffold_278_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9473..10180)
DNA (708bp) protein (236aa)
Transcriptional regulator, GntR family n=6 Tax=Bifidobacterium RepID=E3EQI3_BIFBS
yydK; putative HTH-type transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:KFI44028.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_019_000G1_scaffold_278_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10409..10987)
DNA (579bp) protein (193aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=R6GAJ2_9BIFI
putative lipo protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53868.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_278_14
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10980..11786)
DNA (807bp) protein (269aa)
ATP-binding protein of ABC transporter system n=5 Tax=Bifidobacterium RepID=E3EQI5_BIFBS
ABC transporter ATP-binding protein
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:CDB22449.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_000G1_scaffold_278_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11809..13104)
DNA (1296bp) protein (432aa)
Putative permease protein of ABC transportersystem n=2 Tax=Bifidobacterium RepID=I3WK99_BIFBI
putative permease protein of ABC transportersystem
Putative permease protein of ABC transportersystem {ECO:0000313|EMBL:CDB22450.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_000G1_scaffold_278_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13137..14438)
DNA (1302bp) protein (434aa)
Permease protein of ABC transporter system n=4 Tax=Bifidobacterium bifidum RepID=E4P021_BIFBP
ABC transporter permease
Permease protein of ABC transporter system {ECO:0000313|EMBL:KFI44032.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_019_000G1_scaffold_278_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14459..15745)
DNA (1287bp) protein (429aa)
Conserved hypothetical membrane spanning protein n=3 Tax=Bifidobacterium RepID=E3EQI8_BIFBS
hypothetical protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ADO53872.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_278_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15851..16534)
DNA (684bp) protein (228aa)
Fe2+ high-affinity transport protein n=3 Tax=Bifidobacterium RepID=E3EQI9_BIFBS
Fe2+ high-affinity transport protein
Fe2+ high-affinity transport protein {ECO:0000313|EMBL:AFL05315.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_000G1_scaffold_278_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16569..18335)
DNA (1767bp) protein (589aa)
Membrane protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKA3_BIFBI
ywbL; membrane protein
Membrane protein {ECO:0000313|EMBL:AFL05316.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_000G1_scaffold_278_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18576..18752)
DNA (177bp) protein (59aa)
Putative symporter n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKA4_BIFBI
melB; putative symporter
Putative symporter {ECO:0000313|EMBL:AFL05317.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_000G1_scaffold_278_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18988..19980
DNA (993bp) protein (331aa)
Thiamine biosynthesis relatedmembrane-associated lipo protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKA6_BIFBI
apbE; thiamine biosynthesis relatedmembrane-associated lipo protein
Thiamine biosynthesis relatedmembrane-associated lipo protein {ECO:0000313|EMBL:AFL05319.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_000G1_scaffold_278_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20032..20835)
DNA (804bp) protein (268aa)
Filamentation related protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HUH6_BIFBI
Filamentation related protein {ECO:0000313|EMBL:EKE51133.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Fic family protein
L2_019_000G1_scaffold_278_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21329..22987)
DNA (1659bp) protein (553aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Phosphoenolpyruvate-protein phosphotransferase n=6 Tax=Bifidobacterium RepID=E3EQJ5_BIFBS
phosphoenolpyruvate-protein phosphotransferase
L2_019_000G1_scaffold_278_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23345..23605
DNA (261bp) protein (87aa)
Phosphocarrier protein HPr n=7 Tax=Bifidobacterium RepID=E3EQJ6_BIFBS
phosphocarrier protein HPr
Phosphocarrier protein Hpr {ECO:0000313|EMBL:EKF16381.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_019_000G1_scaffold_278_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23767..24849
DNA (1083bp) protein (361aa)
Transcriptional regulator, LacI family n=4 Tax=Bifidobacterium bifidum RepID=E4P030_BIFBP
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:KFI44040.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_019_000G1_scaffold_278_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24860..26044)
DNA (1185bp) protein (395aa)
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EFR50823.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFR50823.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
DNA polymerase III, delta' subunit n=3 Tax=Bifidobacterium bifidum RepID=E4VB58_BIFBI
holB; DNA polymerase III subunit delta'
L2_019_000G1_scaffold_278_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26041..26775)
DNA (735bp) protein (245aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HUF5_BIFBI
L2_019_000G1_scaffold_278_28
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26856..29759)
DNA (2904bp) protein (968aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GLM7_9BIFI
L2_019_000G1_scaffold_278_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29844..31241)
DNA (1398bp) protein (466aa)
ABC transporter n=1 Tax=Bifidobacterium bifidum RepID=UPI00019772FC
Uncharacterized protein {ECO:0000313|EMBL:EKE51126.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_019_000G1_scaffold_278_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31685..35752)
DNA (4068bp) protein (1356aa)
Subtilisin family peptidase (EC:3.4.21.96)
Subtilisin family peptidase n=2 Tax=Bifidobacterium bifidum RepID=E4P035_BIFBP
PA domain protein {ECO:0000313|EMBL:ERI82722.1}; Putative protease {ECO:0000313|EMBL:BAQ98933.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Displaying items 1-30 of 92 in total

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