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L2_019_000G1_scaffold_287

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_287_1
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(107..457)
DNA (351bp) protein (117aa)
UPF0102 protein BN634_01066 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEH0_9FIRM
UPF0102 protein BN634_01066 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
endonuclease
L2_019_000G1_scaffold_287_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(457..762)
DNA (306bp) protein (102aa)
Flagellar biosynthesis protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC88_9FIRM
Flagellar biosynthesis protein {ECO:0000313|EMBL:CDE36593.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
flagellar biosynthesis protein
L2_019_000G1_scaffold_287_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(823..2442)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36594.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_287_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2447..3136)
DNA (690bp) protein (230aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Ribonuclease HII n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB29_9FIRM
rnhB; ribonuclease HII
L2_019_000G1_scaffold_287_5
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3151..3996)
DNA (846bp) protein (282aa)
Ribosome biogenesis GTPase A n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB98_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ribosome biogenesis GTP-binding protein YlqF
L2_019_000G1_scaffold_287_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4024..4581)
DNA (558bp) protein (186aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Signal peptidase I n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEH4_9FIRM
signal peptidase I
L2_019_000G1_scaffold_287_7
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4657..5004)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC93_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
rplS; 50S ribosomal protein L19
L2_019_000G1_scaffold_287_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5130..5645)
DNA (516bp) protein (172aa)
Ribosome maturation factor RimM n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA83_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
rimM; 16S rRNA-processing protein RimM
L2_019_000G1_scaffold_287_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5735..5965)
DNA (231bp) protein (77aa)
UPF0109 protein BN634_01074 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB34_9FIRM
UPF0109 protein BN634_01074 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_287_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5988..6233)
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBA4_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
rpsP; 30S ribosomal protein S16
L2_019_000G1_scaffold_287_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6277..7626)
DNA (1350bp) protein (450aa)
Signal recognition particle protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEI0_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
signal recognition particle, subunit SRP54
L2_019_000G1_scaffold_287_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7655..7999)
DNA (345bp) protein (115aa)
UPF0122 protein BN634_01077 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC98_9FIRM
UPF0122 protein BN634_01077 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_287_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8105..9397)
DNA (1293bp) protein (431aa)
Putative permease n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA87_9FIRM
Putative permease {ECO:0000313|EMBL:CDE36604.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
permease
L2_019_000G1_scaffold_287_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9512..11644)
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36605.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_287_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12052..13269)
DNA (1218bp) protein (406aa)
Threonine dehydratase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBA9_9FIRM
Threonine dehydratase {ECO:0000313|EMBL:CDE36606.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
threonine dehydratase
L2_019_000G1_scaffold_287_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13302..14225)
DNA (924bp) protein (308aa)
Signal recognition particle receptor FtsY n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEI5_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
signal recognition particle receptor
L2_019_000G1_scaffold_287_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14275..17850)
DNA (3576bp) protein (1192aa)
Chromosome partition protein Smc n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCA4_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
chromosome segregation protein
L2_019_000G1_scaffold_287_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17854..18570)
DNA (717bp) protein (239aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Ribonuclease 3 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA92_9FIRM
ribonuclease III
L2_019_000G1_scaffold_287_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18788..19021)
DNA (234bp) protein (78aa)
Acyl carrier protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB47_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
acpP; acyl carrier protein
L2_019_000G1_scaffold_287_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19119..20147)
DNA (1029bp) protein (343aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Phosphate acyltransferase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBB3_9FIRM
fatty acid/phospholipid synthesis protein
L2_019_000G1_scaffold_287_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20224..20772)
DNA (549bp) protein (183aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Phosphoglycerate mutase family protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEI9_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:CDE36612.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
L2_019_000G1_scaffold_287_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20951..21130)
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCB1_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ribosomal protein L32
L2_019_000G1_scaffold_287_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21133..21657)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36614.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_287_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21834..23033)
DNA (1200bp) protein (400aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Acetate kinase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB54_9FIRM
acetate kinase
L2_019_000G1_scaffold_287_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23059..24060)
DNA (1002bp) protein (334aa)
Phosphate acetyltransferase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBB7_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:CDE36616.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
phosphate acetyltransferase
L2_019_000G1_scaffold_287_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24371..25663
DNA (1293bp) protein (431aa)
UPF0348 protein CLONEX_01560 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HEJ5_9FIRM
UPF0348 protein BN634_01091 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_287_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25710..26219)
DNA (510bp) protein (170aa)
Putative G/U mismatch-specific DNA glycosylase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCB8_9FIRM
Putative G/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:CDE36618.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
G:T/U mismatch-specific DNA glycosylase
L2_019_000G1_scaffold_287_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26235..27095)
DNA (861bp) protein (287aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAA2_9FIRM
L2_019_000G1_scaffold_287_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27277..28641)
DNA (1365bp) protein (455aa)
UPF0210 protein BN634_01094 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HB60_9FIRM
UPF0210 protein BN634_01094 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_019_000G1_scaffold_287_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28747..29019)
DNA (273bp) protein (91aa)
UPF0237 protein BN634_01095 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBC1_9FIRM
UPF0237 protein BN634_01095 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
Displaying items 1-30 of 62 in total

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