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L2_019_000G1_scaffold_303

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_303_1
unknown

Not on your lists

comp(378..488)
DNA (111bp) protein (37aa)

This feature has no annotations

L2_019_000G1_scaffold_303_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(571..1578)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBU1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39052.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_019_000G1_scaffold_303_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1883..2572
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBU3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39053.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_019_000G1_scaffold_303_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2680..3825
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBU4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39054.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_019_000G1_scaffold_303_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3954..5792)
DNA (1839bp) protein (613aa)
GTP-binding protein TypA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBU6_9ACTN
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:KGI75773.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GTP-binding protein TypA
L2_019_000G1_scaffold_303_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5910..6359)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D3F8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75772.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_019_000G1_scaffold_303_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6390..6746)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBU7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39057.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
heat shock protein DnaJ domain-containing protein
L2_019_000G1_scaffold_303_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6777..7277)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6L0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75770.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_019_000G1_scaffold_303_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(8064..10805)
DNA (2742bp) protein (914aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2E6_9ACTN
L2_019_000G1_scaffold_303_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10817..12847)
DNA (2031bp) protein (677aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZM41_9ACTN
L2_019_000G1_scaffold_303_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12953..13516)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECR7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75767.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_019_000G1_scaffold_303_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13503..14609)
DNA (1107bp) protein (369aa)
DNA replication and repair protein RecF n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECR8_9ACTN
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DNA replication and repair protein RecF
L2_019_000G1_scaffold_303_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14620..15723)
DNA (1104bp) protein (368aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFJ5_9ACTN
L2_019_000G1_scaffold_303_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15962..17686)
DNA (1725bp) protein (575aa)
Chromosomal replication initiator protein dnaA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS0_9ACTN
Chromosomal replication initiator protein dnaA {ECO:0000256|RuleBase:RU000577}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
chromosomal replication initiator protein DnaA
L2_019_000G1_scaffold_303_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17702..19051)
DNA (1350bp) protein (450aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6I9_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA35328.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATP-binding region ATPase domain-containing protein
L2_019_000G1_scaffold_303_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


19376..19531
DNA (156bp) protein (52aa)
50S ribosomal protein L34 n=3 Tax=Collinsella RepID=A4ECS2_9ACTN
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
LSU ribosomal protein L34P
L2_019_000G1_scaffold_303_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19552..19890
DNA (339bp) protein (113aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Ribonuclease P protein component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS3_9ACTN
ribonuclease P protein component
L2_019_000G1_scaffold_303_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19887..20111
DNA (225bp) protein (75aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Z7_9ACTN
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_019_000G1_scaffold_303_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20141..20911
DNA (771bp) protein (257aa)
Membrane protein insertase YidC/Oxa1 family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFG5_9ACTN
Membrane protein insertase YidC/Oxa1 family {ECO:0000313|EMBL:CDA35324.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
YidC/Oxa1 family membrane protein insertase
L2_019_000G1_scaffold_303_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20957..21526
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6I4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35323.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
single-stranded nucleic acid binding R3H domain-containing protein
L2_019_000G1_scaffold_303_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21623..22360
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS6_9ACTN
methyltransferase GidB
L2_019_000G1_scaffold_303_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22495..23295
DNA (801bp) protein (267aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5ZM18_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75756.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
chromosome segregation ATPase
L2_019_000G1_scaffold_303_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23288..24193
DNA (906bp) protein (302aa)
ParB-like protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Z2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75755.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
parB-like partition protein
L2_019_000G1_scaffold_303_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24183..24437
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFF8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35319.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_019_000G1_scaffold_303_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24635..25687)
DNA (1053bp) protein (351aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT0_9ACTN
L2_019_000G1_scaffold_303_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25773..26738
DNA (966bp) protein (322aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5U7_9ACTN
L2_019_000G1_scaffold_303_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26732..29626
DNA (2895bp) protein (965aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
Putative DnaQ family exonuclease/DinG family helicase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZEU7_9ACTN
Putative DnaQ family exonuclease/DinG family helicase {ECO:0000313|EMBL:CDA35089.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_019_000G1_scaffold_303_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29623..30540)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8A2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75750.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
protein pafC
L2_019_000G1_scaffold_303_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30527..31549)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLG5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35091.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
helix-turn-helix type 11 domain-containing protein
L2_019_000G1_scaffold_303_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31748..34918
DNA (3171bp) protein (1057aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38620.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
Displaying items 1-30 of 48 in total

View Taxonomy