ggKbase home page

L2_019_000G1_scaffold_312

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_312_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(896..2668)
DNA (1773bp) protein (591aa)
ade; adenine deaminase Ade (EC:3.5.4.2)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
adenine deaminase n=1 Tax=Clostridium beijerinckii RepID=UPI0002F70BEA
L2_019_000G1_scaffold_312_2
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2899..3633
DNA (735bp) protein (245aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1053183 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG3X2-1.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Bacillus cereus BAG3X2-1 RepID=J7Y4N1_BACCE
gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
L2_019_000G1_scaffold_312_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3654..4433)
DNA (780bp) protein (260aa)
Transcriptional regulator, DeoR family n=2 Tax=Clostridium butyricum RepID=M8KBW2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89073.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
deoR; deoxyribose operon repressor
L2_019_000G1_scaffold_312_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4747..5409
DNA (663bp) protein (221aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=4 Tax=Clostridium butyricum RepID=B1QZT0_CLOBU
L2_019_000G1_scaffold_312_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5734..7035
DNA (1302bp) protein (434aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:KJZ86486.1}; EC=2.4.2.2 {ECO:0000313|EMBL:KJZ86486.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=2 Tax=Clostridium butyricum RepID=M8JIE4_CLOBU
L2_019_000G1_scaffold_312_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7173..7712)
DNA (540bp) protein (180aa)
50S ribosomal protein L25 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BSF6_9CLOT
50S ribosomal protein L25 {ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|SAAS:SAAS00023360}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
50S ribosomal protein L25
L2_019_000G1_scaffold_312_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8368..9303
DNA (936bp) protein (312aa)
MoxR-like ATPase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAE9_9CLOT
MoxR-like ATPase {ECO:0000313|EMBL:EKQ55189.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ATPase
L2_019_000G1_scaffold_312_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9303..10487
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TS93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ55190.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_019_000G1_scaffold_312_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10490..12811
DNA (2322bp) protein (774aa)
Transglutaminase-like enzyme, putative cysteine protease n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U2N5_9CLOT
Transglutaminase-like enzyme, putative cysteine protease {ECO:0000313|EMBL:EKQ55191.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
transglutaminase domain-containing protein
L2_019_000G1_scaffold_312_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13049..13846
DNA (798bp) protein (266aa)
hmp; flavohemoprotein Hmp (EC:1.14.12.17)
Flavohemoprotein Hmp {ECO:0000313|EMBL:AGX44755.1}; EC=1.14.12.17 {ECO:0000313|EMBL:AGX44755.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Flavohemoprotein Hmp n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVX2_CLOSA
L2_019_000G1_scaffold_312_11
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13918..15375
DNA (1458bp) protein (486aa)
gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase GapN (EC:1.2.1.9)
Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1C4_9CLOT
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EKQ57257.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_019_000G1_scaffold_312_12
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15706..16254
DNA (549bp) protein (183aa)
Uncharacterized conserved protein YTFE family possibly metal-binding n=1 Tax=Clostridium sp. CAG:221 RepID=R6GM30_9CLOT
hemerythrin HHE cation binding domain protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:CDM68905.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_019_000G1_scaffold_312_13
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16351..17052
DNA (702bp) protein (234aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSH4_9CLOT
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EET87852.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
L2_019_000G1_scaffold_312_14
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17222..17572
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JLX0_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ84646.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_019_000G1_scaffold_312_15
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17844..18482
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KLL8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB76073.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
L2_019_000G1_scaffold_312_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19065..20273
DNA (1209bp) protein (403aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine-tRNA ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HD37_9CLOT
L2_019_000G1_scaffold_312_17
unknown

Not on your lists

comp(20382..20711)
DNA (330bp) protein (110aa)

This feature has no annotations

L2_019_000G1_scaffold_312_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20780..21592)
DNA (813bp) protein (271aa)
Putative ABC transporter, permease protein n=2 Tax=Clostridium botulinum B RepID=B2TKS8_CLOBB
ABC transporter permease
Putative ABC transporter, permease protein {ECO:0000313|EMBL:ACD23431.1}; Putative transmembrane protein {ECO:0000313|EMBL:CDH89604.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_019_000G1_scaffold_312_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21586..22335)
DNA (750bp) protein (250aa)
ABC transporter related protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4J8_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:EHJ01573.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
ABC-type multidrug transport system, ATPase component
L2_019_000G1_scaffold_312_20
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22338..22706)
DNA (369bp) protein (123aa)
Regulatory protein GntR, HTH n=2 Tax=Clostridium RepID=A6LRJ5_CLOB8
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:ETD70533.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_019_000G1_scaffold_312_21
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23087..23464
DNA (378bp) protein (126aa)
RutC family protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LNU2_9CLOT
RutC family protein
RutC family protein {ECO:0000313|EMBL:AGF54510.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_000G1_scaffold_312_22
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23811..24662
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M0V3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF59195.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_000G1_scaffold_312_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25124..26461
DNA (1338bp) protein (446aa)
coenzyme A disulfide reductase (EC:1.6.99.3)
NADH oxidase (Noxase) n=2 Tax=Clostridium butyricum RepID=M8JGU7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92380.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_019_000G1_scaffold_312_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26758..27063
DNA (306bp) protein (102aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TWA9_9CLOT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
clpS; ATP-dependent Clp protease adapter protein ClpS
L2_019_000G1_scaffold_312_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27066..29327
DNA (2262bp) protein (754aa)
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MYV0_CLOSA
clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:AGX44836.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_312_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29386..31365)
DNA (1980bp) protein (660aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UV58_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES49776.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L2_019_000G1_scaffold_312_27
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31578..32123
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LUN5_CLOB8
hypothetical protein
Late competence development protein ComFB {ECO:0000313|EMBL:AJG98652.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L2_019_000G1_scaffold_312_28
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32732..33211
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MV71_9CLOT
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AGF55412.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_000G1_scaffold_312_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33208..34380
DNA (1173bp) protein (391aa)
Aspartate aminotransferase n=3 Tax=Clostridium butyricum RepID=B1QZP4_CLOBU
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:KHD15934.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
aminotransferase, class I and II
L2_019_000G1_scaffold_312_30
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34721..35539)
DNA (819bp) protein (273aa)
Cof family hydrolase n=1 Tax=Clostridium intestinale URNW RepID=U2PY46_9CLOT
Cof family hydrolase {ECO:0000313|EMBL:ERK31405.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
HAD superfamily hydrolase
Displaying items 1-30 of 53 in total

View Taxonomy