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L2_019_000G1_scaffold_321

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_321_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53..1264)
DNA (1212bp) protein (404aa)
Xylose repressor protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IH86_CLOBU
Xylose repressor protein {ECO:0000313|EMBL:EEP53989.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
xylR; ROK family protein
L2_019_000G1_scaffold_321_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1422..2702
DNA (1281bp) protein (427aa)
PTS system, cellobiose-specific IIC component n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IH85_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative PTS system, cellobiose-specific IIC component
L2_019_000G1_scaffold_321_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2715..4610
DNA (1896bp) protein (632aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QY05_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52982.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_019_000G1_scaffold_321_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4673..5557
DNA (885bp) protein (295aa)
Putative sugar ABC transporter permease n=2 Tax=Clostridium butyricum RepID=B1QY04_CLOBU
Putative sugar ABC transporter permease {ECO:0000313|EMBL:EEP53942.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
binding-protein-dependent transport system inner membrane protein
L2_019_000G1_scaffold_321_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5562..6368
DNA (807bp) protein (269aa)
Sugar ABC transporter permease n=2 Tax=Clostridium butyricum RepID=B1QY03_CLOBU
Sugar ABC transporter permease {ECO:0000313|EMBL:EEP53164.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
sugar permease
L2_019_000G1_scaffold_321_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6372..7817
DNA (1446bp) protein (482aa)
Putative bacterial extracellular solute-binding protein n=2 Tax=Clostridium butyricum RepID=B1QY02_CLOBU
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EEP54894.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
extracellular solute-binding protein
L2_019_000G1_scaffold_321_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7992..8405
DNA (414bp) protein (138aa)
Acetyltransferase, gnat family n=2 Tax=Clostridium butyricum RepID=B1QY01_CLOBU
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEP53999.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_019_000G1_scaffold_321_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8818..9900
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Phosphoserine aminotransferase n=2 Tax=Clostridium butyricum RepID=B1QY78_CLOBU
MFS transporter
L2_019_000G1_scaffold_321_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10375..11700
DNA (1326bp) protein (442aa)
glvA-1; maltose-6'-phosphate glucosidase (EC:3.2.1.122)
Maltose-6'-phosphate glucosidase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVI9_9CLOT
Maltose-6'-phosphate glucosidase {ECO:0000313|EMBL:EOR21047.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L2_019_000G1_scaffold_321_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12003..13529
DNA (1527bp) protein (509aa)
PTS system maltose and glucose-specific transporter subunit IIC n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVH1_9CLOT
PTS system maltose and glucose-specific transporter subunit IIC {ECO:0000313|EMBL:EOR21048.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
PTS system maltose/glucose-specfic transporter subunit IIBC
L2_019_000G1_scaffold_321_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13567..14340)
DNA (774bp) protein (258aa)
Sialic acid utilization regulator, RpiR family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BV72_9CLOT
Sialic acid utilization regulator, RpiR family protein {ECO:0000313|EMBL:EOR21049.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
RpiR family transcriptional regulator
L2_019_000G1_scaffold_321_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14365..15138)
DNA (774bp) protein (258aa)
Transcriptional regulator, RpiR family n=3 Tax=Clostridium botulinum RepID=C3KZ91_CLOB6
RpiR family transcriptional regulator
SIS domain protein {ECO:0000313|EMBL:AJE12471.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
L2_019_000G1_scaffold_321_13
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15218..16144
DNA (927bp) protein (309aa)
Transporter n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I4W3_9CLOT
Transporter {ECO:0000313|EMBL:ETA80224.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
putative auxin efflux carrier
L2_019_000G1_scaffold_321_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16274..16756
DNA (483bp) protein (161aa)
PTS system, glucose family, EIIA component n=2 Tax=Clostridium botulinum RepID=C3KZ92_CLOB6
PTS system glucose family Etransporter subunit IIA
PTS system, glucose family, EIIA component {ECO:0000313|EMBL:ACO86376.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
L2_019_000G1_scaffold_321_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16979..17551
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99737.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_019_000G1_scaffold_321_16
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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17995..18189
DNA (195bp) protein (65aa)
Helix-turn-helix domain protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LT82_TEPAE
Helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCP27412.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L2_019_000G1_scaffold_321_17

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18240..19073
DNA (834bp) protein (278aa)
Putative phage replisome organizer n=3 Tax=Clostridium botulinum RepID=C3KWT5_CLOB6
Replisome organizer {ECO:0000313|EMBL:AJA42836.1}; TaxID=1567011 species="Viruses; unclassified phages.;" source="Clostridium phage phiCT19406C.;"
putative phage replisome organizer
L2_019_000G1_scaffold_321_18
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19086..20375
DNA (1290bp) protein (430aa)
dnaC1; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase DnaC {ECO:0000313|EMBL:AGF59457.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AGF59457.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Replicative DNA helicase DnaC n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N7V8_9CLOT
L2_019_000G1_scaffold_321_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20455..21045)
DNA (591bp) protein (197aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TKL2_CLOBB
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACD23338.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_019_000G1_scaffold_321_20
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

21273..23258
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PVY7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO79841.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
hypothetical protein
L2_019_000G1_scaffold_321_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23422..24771
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D583_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEG53538.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
putative efflux protein, MATE family
L2_019_000G1_scaffold_321_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24960..25439
DNA (480bp) protein (160aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
S-ribosylhomocysteinase n=1 Tax=Clostridium beijerinckii RepID=UPI0002E9E819
S-ribosylhomocysteinase
L2_019_000G1_scaffold_321_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25928..26881)
DNA (954bp) protein (318aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXC8_CLOSA
DNA methylase N-4/N-6 domain protein
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:AGX45419.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_321_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27318..27827
DNA (510bp) protein (170aa)
Ferritin {ECO:0000256|RuleBase:RU361145, ECO:0000313|EMBL:AIY82593.1}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Ferritin family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRQ8_CLOP1
ferritin
L2_019_000G1_scaffold_321_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27959..28744)
DNA (786bp) protein (262aa)
UPI0003D66B33 related cluster n=1 Tax=unknown RepID=UPI0003D66B33
Phosphatase YbjI {ECO:0000313|EMBL:ETI87911.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
HAD hydrolase, IIB family protein
L2_019_000G1_scaffold_321_26
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29049..29765
DNA (717bp) protein (239aa)
DeoR-like helix-turn-helix domain protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T2RCH6_CLOSO
DeoR family transcriptional regulator {ECO:0000313|EMBL:CEP90052.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
DeoR-family transcriptional regulator
L2_019_000G1_scaffold_321_27
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30222..32126
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RJ67_9FIRM
PRD domain protein {ECO:0000313|EMBL:EDS19848.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
BigG family transcription antiterminator
L2_019_000G1_scaffold_321_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

32141..32716
DNA (576bp) protein (192aa)
RDD family protein n=2 Tax=Erysipelotrichaceae RepID=B0N289_9FIRM
RDD family protein {ECO:0000313|EMBL:EDS19849.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
RDD family.
L2_019_000G1_scaffold_321_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

32805..33119
DNA (315bp) protein (105aa)
Phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
PTS system Lactose/Cellobiose specific IIA subunit n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9H0_9FIRM
PTS system Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:CCZ25208.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_019_000G1_scaffold_321_30
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

33212..33538
DNA (327bp) protein (109aa)
PTS system cellobiose-specific transporter subunit IIB (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=4 Tax=Erysipelotrichaceae RepID=B0N291_9FIRM
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:EHQ45346.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Displaying items 1-30 of 54 in total

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