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L2_019_000G1_scaffold_424

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_424_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1278)
DNA (1278bp) protein (426aa)
MDR-type permease n=2 Tax=Bifidobacterium bifidum RepID=I3WG79_BIFBI
MDR-type permease
MDR-type permease {ECO:0000313|EMBL:AFL03892.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_000G1_scaffold_424_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1510..2301
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DR90_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42404.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L2_019_000G1_scaffold_424_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2241..3299)
DNA (1059bp) protein (353aa)
RbsK Ribokinase n=5 Tax=Bifidobacterium bifidum RepID=E4NZD9_BIFBP
rbsK; ribokinase RbsK
RbsK Ribokinase {ECO:0000313|EMBL:KFI42405.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_019_000G1_scaffold_424_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3559..3753
DNA (195bp) protein (65aa)
50S ribosomal protein L28 n=7 Tax=Bifidobacterium RepID=E3ENP1_BIFBS
rpmB1; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_019_000G1_scaffold_424_5
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3873..6557
DNA (2685bp) protein (895aa)
ATP-dependent DNA helicase n=2 Tax=Bifidobacterium RepID=E3ENP2_BIFBS
recG; ATP-dependent DNA helicase
ATP-dependent DNA helicase {ECO:0000313|EMBL:CDB22534.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_000G1_scaffold_424_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6738..8045
DNA (1308bp) protein (436aa)
Amino acid transporter n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HXW1_BIFBI
Amino acid transporter {ECO:0000313|EMBL:EKE51297.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
amino acid transporter
L2_019_000G1_scaffold_424_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8095..8268
DNA (174bp) protein (58aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=I3WG84_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03897.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_000G1_scaffold_424_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8604..9593
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WG85_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42409.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_019_000G1_scaffold_424_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9657..11567
DNA (1911bp) protein (637aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2I8N0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE51294.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_019_000G1_scaffold_424_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11576..13213
DNA (1638bp) protein (546aa)
Sodium:dicarboxylate symporter protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WG87_BIFBI
sodium:dicarboxylate symporter protein
Sodium:dicarboxylate symporter protein {ECO:0000313|EMBL:AFL03900.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_000G1_scaffold_424_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13523..14185
DNA (663bp) protein (221aa)
Putative methyl transferase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GAU7_9BIFI
Putative methyl transferase {ECO:0000313|EMBL:CDB22528.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
putative methyl transferase
L2_019_000G1_scaffold_424_12
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14414..15016
DNA (603bp) protein (201aa)
Oxidoreductase/nitroreductase n=2 Tax=Bifidobacterium RepID=E4NZE7_BIFBP
oxidoreductase/nitroreductase
Oxidoreductase/nitroreductase {ECO:0000313|EMBL:CDB22527.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_000G1_scaffold_424_13
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15167..15619)
DNA (453bp) protein (151aa)
Hsp20-family heat shock chaperone n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GMS5_9BIFI
Hsp20-family heat shock chaperone {ECO:0000313|EMBL:CDB22526.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Hsp20-family heat shock chaperone
L2_019_000G1_scaffold_424_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15866..16864)
DNA (999bp) protein (333aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014918}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014917};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I8M6_BIFBI
tRNA (guanine-N1)-methyltransferase
L2_019_000G1_scaffold_424_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17115..17729)
DNA (615bp) protein (205aa)
Ribosome maturation factor RimM n=3 Tax=Bifidobacterium RepID=E3ENQ2_BIFBS
rimM; 16S rRNA processing protein rimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_019_000G1_scaffold_424_16
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17726..17959)
DNA (234bp) protein (78aa)
UPF0109 protein BBIF_0340 n=8 Tax=Bifidobacterium RepID=E3ENQ3_BIFBS
RNA-binding protein
UPF0109 protein BBCT_0186 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L2_019_000G1_scaffold_424_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17962..18405)
DNA (444bp) protein (148aa)
30S ribosomal protein S16 n=5 Tax=Bifidobacterium RepID=E3ENQ4_BIFBS
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_019_000G1_scaffold_424_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18633..18830
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V7U9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR49691.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_019_000G1_scaffold_424_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18983..20512)
DNA (1530bp) protein (510aa)
Multiple substrate aminotransferase (MsaT) containing domain of GntR family (Transcriptional regulator) n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENQ5_BIFBS
Multiple substrate aminotransferase (MsaT) containing domain of GntR family (transcriptional regulator)
Multiple substrate aminotransferase (MsaT) containing domain of GntR family (Transcriptional regulator) {ECO:0000313|EMBL:ADO52547.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_424_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20715..21407
DNA (693bp) protein (231aa)
Lysine exporter protein n=3 Tax=Bifidobacterium RepID=E3ENQ6_BIFBS
lysine exporter
Arginine exporter {ECO:0000313|EMBL:EKE51283.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_019_000G1_scaffold_424_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21677..22849)
DNA (1173bp) protein (391aa)
Endonuclease/exonuclease/phosphatase n=3 Tax=Bifidobacterium bifidum RepID=I3WG97_BIFBI
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AFL03910.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_019_000G1_scaffold_424_22
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(23025..24671)
DNA (1647bp) protein (549aa)
Signal recognition particle protein n=5 Tax=Bifidobacterium RepID=E4NZF6_BIFBP
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_019_000G1_scaffold_424_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25032..25940
DNA (909bp) protein (303aa)
Cation efflux protein n=4 Tax=Bifidobacterium bifidum RepID=I3WG99_BIFBI
cation efflux protein
Membrane spanning protein {ECO:0000313|EMBL:KFI42423.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_019_000G1_scaffold_424_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26161..27783)
DNA (1623bp) protein (541aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Cysteine--tRNA ligase n=3 Tax=Bifidobacterium bifidum RepID=E4V7V7_BIFBI
cysS; cysteinyl-tRNA synthetase
L2_019_000G1_scaffold_424_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27930..28655
DNA (726bp) protein (242aa)
Amidotransferase n=7 Tax=Bifidobacterium RepID=E3ENR1_BIFBS
amidotransferase
Class I glutamine amidotransferase {ECO:0000313|EMBL:ERI82240.1}; Putative amidotransferase {ECO:0000313|EMBL:BAQ97538.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_019_000G1_scaffold_424_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28764..30884
DNA (2121bp) protein (707aa)
ATP-binding protein of ABC transporter system n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENR2_BIFBS
ABC transporter ATP-binding protein
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ADO52554.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_424_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30905..31246)
DNA (342bp) protein (114aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WGA3_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52555.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_424_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31416..31910
DNA (495bp) protein (165aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Phosphopantetheine adenylyltransferase n=2 Tax=Bifidobacterium bifidum RepID=E3EPL9_BIFBS
coaD; phosphopantetheine adenylyltransferase
L2_019_000G1_scaffold_424_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31994..32899
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPM0_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52557.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_019_000G1_scaffold_424_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32964..33578
DNA (615bp) protein (205aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=R6GDV3_9BIFI
hypothetical protein
Putative ACR, COG1399 {ECO:0000313|EMBL:EFR49705.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Displaying items 1-30 of 41 in total

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