ggKbase home page

L2_019_000G1_scaffold_430

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_430_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..389)
DNA (387bp) protein (129aa)
btuR; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Cob(I)alamin adenolsyltransferase n=86 Tax=Escherichia RepID=A1AAN9_ECOK1
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:EQX28814.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_019_000G1_scaffold_430_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(386..622)
DNA (237bp) protein (79aa)
Oxoacyl-(Acyl carrier protein) reductase, EmrKY-TolC system protein n=6 Tax=Escherichia coli RepID=T6HQZ8_ECOLX
Oxoacyl-(Acyl carrier protein) reductase, EmrKY-TolC system protein {ECO:0000313|EMBL:EQP56594.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
yciK; Dehydrogenases with different specificities
L2_019_000G1_scaffold_430_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(619..945)
DNA (327bp) protein (109aa)
Oxoacyl-(Acyl carrier protein) reductase, EmrKY-TolC system protein n=6 Tax=Escherichia coli RepID=T6HQZ8_ECOLX
Oxoacyl-(Acyl carrier protein) reductase, EmrKY-TolC system protein {ECO:0000313|EMBL:EQP56594.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
short chain dehydrogenase
L2_019_000G1_scaffold_430_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

964..2016
DNA (1053bp) protein (351aa)
sohB; periplasmic protease (EC:3.4.21.-)
Signal peptide peptidase SppA, 36K type n=27 Tax=Escherichia coli RepID=L3BAP1_ECOLX
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:EQP56595.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_430_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2052..2303)
DNA (252bp) protein (84aa)
Protein YciN n=1414 Tax=cellular organisms RepID=YCIN_ECO57
hypothetical protein
PF10692 family protein {ECO:0000313|EMBL:EII23253.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L2_019_000G1_scaffold_430_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2683..5280
DNA (2598bp) protein (866aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=13 Tax=Escherichia coli RepID=L5IKY4_ECOLX
L2_019_000G1_scaffold_430_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5490..6464
DNA (975bp) protein (325aa)
HTH-type transcriptional regulator CysB n=1291 Tax=Enterobacteriaceae RepID=CYSB_ECO57
LysR family transcriptional regulator
HTH-type transcriptional regulator CysB {ECO:0000313|EMBL:KDW81966.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L2_019_000G1_scaffold_430_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6795..6923
DNA (129bp) protein (43aa)
Uncharacterized protein n=49 Tax=Escherichia coli RepID=B7MUB5_ECO81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP56599.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_430_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6926..7093
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=3 Tax=Escherichia coli RepID=D5D1S9_ECOKI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW99080.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_019_000G1_scaffold_430_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7452..10127
DNA (2676bp) protein (892aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
Aconitate hydratase 1 n=11 Tax=Escherichia coli RepID=E9UGP6_ECOLX
acnA; aconitate hydratase 1
L2_019_000G1_scaffold_430_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10191..10781)
DNA (591bp) protein (197aa)
ribA; GTP cyclohydrolase II (EC:3.5.4.25)
GTP cyclohydrolase-2 {ECO:0000256|HAMAP-Rule:MF_00179}; EC=3.5.4.25 {ECO:0000256|HAMAP-Rule:MF_00179};; GTP cyclohydrolase II {ECO:0000256|HAMAP-Rule:MF_00179}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
GTP cyclohydrolase-2 n=380 Tax=Escherichia RepID=RIBA_ECO45
L2_019_000G1_scaffold_430_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10951..11715
DNA (765bp) protein (255aa)
pgpB; phosphatidylglycerophosphatase B (EC:3.1.3.27)
Phosphatidylglycerophosphatase B {ECO:0000313|EMBL:EZJ52788.1}; EC=3.1.3.27 {ECO:0000313|EMBL:EZJ52788.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Phosphatidylglycerophosphatase B n=37 Tax=Escherichia coli RepID=B7MUC0_ECO81
L2_019_000G1_scaffold_430_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11864..12172
DNA (309bp) protein (103aa)
Uncharacterized protein n=311 Tax=Escherichia RepID=B7MLV5_ECO45
yciS; hypothetical protein
Inner membrane protein yciS {ECO:0000313|EMBL:EOW99084.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_019_000G1_scaffold_430_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12179..13348
DNA (1170bp) protein (390aa)
Uncharacterized protein YciM n=1000 Tax=Enterobacteriaceae RepID=YCIM_ECO57
hypothetical protein
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_019_000G1_scaffold_430_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13479..14276
DNA (798bp) protein (266aa)
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Escherichia coli HVH 2 (4-6943160) RepID=T5MDQ0_ECOLX
L2_019_000G1_scaffold_430_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14276..14602
DNA (327bp) protein (109aa)
Translation initiation factor SUI1 n=166 Tax=Escherichia RepID=G0D9I1_ECOLX
translation initiation factor Sui1
Translation initiation factor 1 {ECO:0000313|EMBL:EQP56607.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_430_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14728..14946)
DNA (219bp) protein (73aa)
Osmotically-inducible lipoprotein B n=1315 Tax=Enterobacteriaceae RepID=OSMB_ECO57
osmotically-inducible lipoprotein B OsmB
Osmotically-inducible lipoprotein B {ECO:0000313|EMBL:EHX33808.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
L2_019_000G1_scaffold_430_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15215..15964)
DNA (750bp) protein (250aa)
Uncharacterized HTH-type transcriptional regulator n=221 Tax=Escherichia RepID=E2QLP5_ECOLX
DEOR-type transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EQP56609.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_430_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16054..16227)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) RepID=B7N4A1_ECOLU
hypothetical protein
UPF0509 protein YciZ {ECO:0000256|HAMAP-Rule:MF_01641}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L2_019_000G1_scaffold_430_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16375..18360)
DNA (1986bp) protein (662aa)
RNase II stability modulator n=8 Tax=Enterobacteriaceae RepID=I4S8Q4_ECOLX
Cyclic di-GMP phosphodiesterase Gmr {ECO:0000313|EMBL:EQP56611.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
RNase II stability modulator
L2_019_000G1_scaffold_430_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18594..20528)
DNA (1935bp) protein (645aa)
rnb; exoribonuclease II (EC:3.1.13.1)
Exoribonuclease 2 {ECO:0000256|HAMAP-Rule:MF_01036, ECO:0000256|SAAS:SAAS00050106}; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01036};; Exoribonuclease II {ECO:0000256|HAMAP-Rule:MF_01036}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Exoribonuclease 2 n=259 Tax=Escherichia RepID=RNB_ECOL5
L2_019_000G1_scaffold_430_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20596..21723)
DNA (1128bp) protein (376aa)
Oxidoreductase n=8 Tax=Escherichia coli RepID=L3JZR9_ECOLX
Oxidoreductase {ECO:0000313|EMBL:EQP56613.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
yciW; hypothetical protein
L2_019_000G1_scaffold_430_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21867..22655)
DNA (789bp) protein (263aa)
fabI; enoyl-(acyl carrier protein) reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1051347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3.4880.;"
Enoyl-[acyl-carrier-protein] reductase [NADH] FabI n=988 Tax=Enterobacteriaceae RepID=FABI_ECO57
L2_019_000G1_scaffold_430_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23133..23699
DNA (567bp) protein (189aa)
Transcriptional repressor n=6 Tax=Escherichia coli RepID=L3JB57_ECOLX
eefR; transcriptional regulator EefR
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EGI22670.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L2_019_000G1_scaffold_430_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23848..24969
DNA (1122bp) protein (374aa)
Acriflavine resistance protein A n=245 Tax=Escherichia RepID=A1AAQ8_ECOK1
Putative efflux protein, membrane fusion (MFP) family precursor
Acriflavine resistance protein A {ECO:0000313|EMBL:ABE07041.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_019_000G1_scaffold_430_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24969..28076
DNA (3108bp) protein (1036aa)
Acriflavine resistance protein B n=6 Tax=Escherichia coli RepID=T6HT01_ECOLX
Acriflavine resistance protein B {ECO:0000313|EMBL:EQP56617.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
multidrug efflux protein
L2_019_000G1_scaffold_430_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28080..29453
DNA (1374bp) protein (458aa)
Outer membrane channel protein n=175 Tax=Escherichia RepID=E2QLQ4_ECOLX
outer membrane efflux lipoprotein
Putative outer membrane efflux protein OprM {ECO:0000313|EMBL:ESD41603.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_019_000G1_scaffold_430_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29462..30625
DNA (1164bp) protein (388aa)
Membrane transport protein n=159 Tax=Escherichia RepID=E2QLQ5_ECOLX
drug transport transmembrane protein
Putative membrane transport protein {ECO:0000313|EMBL:ABE07044.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_019_000G1_scaffold_430_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30673..31479)
DNA (807bp) protein (269aa)
Peptide transport system ATP-binding protein SapF n=1058 Tax=Enterobacteriaceae RepID=SAPF_ECOL6
putative ATP-binding protein SapF of peptide transport system
Peptide transport system ATP-binding protein SapF {ECO:0000313|EMBL:ESD99148.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
L2_019_000G1_scaffold_430_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31481..32473)
DNA (993bp) protein (331aa)
Peptide transport system ATP-binding protein SapD n=1412 Tax=Enterobacteriaceae RepID=SAPD_ECO57
Peptide transport system ATP-binding protein sapD
Peptide transport system ATP-binding protein SapD {ECO:0000313|EMBL:EFJ86628.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
Displaying items 1-30 of 44 in total

View Taxonomy