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L2_019_000G1_scaffold_441

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_441_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..420)
DNA (420bp) protein (140aa)
diaminopropionate ammonia-lyase (EC:4.3.1.15)
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:CAJ68970.1}; EC=4.3.1.15 {ECO:0000313|EMBL:CAJ68970.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Diaminopropionate ammonia-lyase family protein n=1 Tax=Clostridium difficile DA00044 RepID=T3KAX1_CLODI
L2_019_000G1_scaffold_441_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(783..1454)
DNA (672bp) protein (224aa)
Flavin reductase n=218 Tax=Clostridium difficile RepID=D5Q3N0_CLODI
iron-sulfur flavoprotein
Putative NAD(P)H-dependent FMN reductase {ECO:0000313|EMBL:CCK98470.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L2_019_000G1_scaffold_441_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1537..3753)
DNA (2217bp) protein (739aa)
putative xanthine dehydrogenase (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=114 Tax=Clostridium difficile RepID=G6BQA7_CLODI
Molybdopterin-binding domain of aldehyde dehydrogenase family protein {ECO:0000313|EMBL:EQH98886.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_019_000G1_scaffold_441_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3756..4226)
DNA (471bp) protein (157aa)
xdhC2; xanthine dehydrogenase iron-sulfur binding subunit XdhC2 (EC:1.17.1.4)
Xanthine dehydrogenase iron-sulfur binding subunit XdhC2 n=191 Tax=Clostridium difficile RepID=Q188F6_CLOD6
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:EQI83173.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L2_019_000G1_scaffold_441_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4288..5709)
DNA (1422bp) protein (474aa)
Amidohydrolase family protein n=185 Tax=Clostridium difficile RepID=G6BQA5_CLODI
Amidohydrolase family protein {ECO:0000313|EMBL:EHJ26696.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
amidohydrolase
L2_019_000G1_scaffold_441_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5755..7116)
DNA (1362bp) protein (454aa)
Uracil-xanthine permease family protein n=31 Tax=Clostridium difficile RepID=T2V3V1_CLODI
xanthine/uracile permease
Putative xanthine/uracile permease {ECO:0000313|EMBL:CDS88197.1}; Xanthine/uracile permease {ECO:0000313|EMBL:CKH21278.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_019_000G1_scaffold_441_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7413..8762)
DNA (1350bp) protein (450aa)
Xanthine permease family protein n=31 Tax=Clostridium difficile RepID=T2V3U7_CLODI
xanthine/uracile permease
Putative xanthine/uracil permease {ECO:0000313|EMBL:CCL30307.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_019_000G1_scaffold_441_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9091..10131)
DNA (1041bp) protein (347aa)
AAA domain family protein n=201 Tax=Clostridium difficile RepID=C9XJV7_CLODC
sigma-54-dependent transcriptional regulator
AAA domain family protein {ECO:0000313|EMBL:EQE62934.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_441_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10458..11726)
DNA (1269bp) protein (423aa)
McrBC 5-methylcytosine restriction system component family protein n=31 Tax=Clostridium difficile RepID=T2V5H1_CLODI
McrBC 5-methylcytosine restriction system component family protein {ECO:0000313|EMBL:EQH98893.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
conserved hypothetical protein
L2_019_000G1_scaffold_441_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11719..13653)
DNA (1935bp) protein (645aa)
AAA domain family protein n=32 Tax=Clostridium difficile RepID=T2V757_CLODI
AAA domain family protein {ECO:0000313|EMBL:EQH98894.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
putative restriction enzyme
L2_019_000G1_scaffold_441_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13682..14404)
DNA (723bp) protein (241aa)
Uncharacterized protein n=150 Tax=Clostridium difficile RepID=G6BQ99_CLODI
Putative cell division GTPase {ECO:0000313|EMBL:CCL22375.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L2_019_000G1_scaffold_441_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14454..15458)
DNA (1005bp) protein (335aa)
DeoR-like helix-turn-helix domain protein n=53 Tax=Clostridium difficile RepID=C9XJW1_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE04987.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_019_000G1_scaffold_441_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15497..15997)
DNA (501bp) protein (167aa)
QueT transporter family protein n=199 Tax=Clostridium difficile RepID=T3GNZ4_CLODC
putative membrane protein, DUF988 family
QueT transporter family protein {ECO:0000313|EMBL:EQE62840.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_441_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16283..16594)
DNA (312bp) protein (104aa)
Uncharacterized protein n=184 Tax=Clostridium difficile RepID=C9XJW3_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE62839.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_441_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16734..18998)
DNA (2265bp) protein (755aa)
XdhD; xanthine dehydrogenase subunit XdhD (EC:1.17.1.4)
Molybdopterin-binding domain of aldehyde dehydrogenase family protein n=33 Tax=Clostridium difficile RepID=T2V5G8_CLODI
Molybdopterin-binding domain of aldehyde dehydrogenase family protein {ECO:0000313|EMBL:EQH98899.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_019_000G1_scaffold_441_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19002..19451)
DNA (450bp) protein (150aa)
2Fe-2S iron-sulfur cluster binding domain protein n=191 Tax=Clostridium difficile RepID=C9XJW5_CLODC
[2Fe-2S]-binding subunit of oxidoreductase
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:EQE62846.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_441_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19451..20239)
DNA (789bp) protein (263aa)
FAD binding domain in molybdopterin dehydrogenase family protein n=153 Tax=Clostridium difficile RepID=C9XJW6_CLODC
FAD-binding subunit of oxidoreductase
Xanthine dehydrogenase subunit XdhB,FAD-binding {ECO:0000313|EMBL:CCL30317.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_019_000G1_scaffold_441_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20434..21702)
DNA (1269bp) protein (423aa)
Transporter, CPA2 family n=190 Tax=Clostridium difficile RepID=G6BCD6_CLODI
Na(+)/H(+) antiporter
Putative Na(+)/H(+) antiporter {ECO:0000313|EMBL:CCK98488.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L2_019_000G1_scaffold_441_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22043..22204)
DNA (162bp) protein (54aa)
Uncharacterized protein n=192 Tax=Clostridium difficile RepID=F3Y5U5_CLOD6
conserved hypothetical protein
Putative dNA polymerase III {ECO:0000313|EMBL:EQH98903.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_019_000G1_scaffold_441_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22353..23435)
DNA (1083bp) protein (361aa)
TIGR00374 family protein n=80 Tax=Clostridium difficile RepID=T2V4X9_CLODI
TIGR00374 family protein {ECO:0000313|EMBL:EQH98904.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
ABC transporter permease
L2_019_000G1_scaffold_441_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23538..25133)
DNA (1596bp) protein (532aa)
ABC-type transport system, permease n=33 Tax=Clostridium difficile RepID=U3YS90_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQH98905.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
ABC-type transport system, permease
L2_019_000G1_scaffold_441_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25180..25887)
DNA (708bp) protein (236aa)
ABC transporter, ATP-binding protein n=194 Tax=Clostridium difficile RepID=C9XJX0_CLODC
ABC transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:EQE62850.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_441_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26140..27285
DNA (1146bp) protein (382aa)
ATP-dependent RNA helicase {ECO:0000313|EMBL:CKH21787.1}; EC=3.6.4.13 {ECO:0000313|EMBL:CKH21787.1};; Putative ATP-dependent RNA helicase {ECO:0000313|EMBL:CDS88348.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Helicase conserved C-terminal domain protein n=63 Tax=Clostridium difficile RepID=T3GJQ2_CLODC
putative ATP-dependent RNA helicase
L2_019_000G1_scaffold_441_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27399..28775)
DNA (1377bp) protein (459aa)
Permease family protein n=175 Tax=Clostridium difficile RepID=T3GIP5_CLODC
Xanthine/uracil/thiamine/ascorbate permeasefamily protein
Permease family protein {ECO:0000313|EMBL:EQE62856.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_441_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29221..30567
DNA (1347bp) protein (449aa)
MATE efflux family protein n=17 Tax=Clostridium difficile RepID=T2UQR1_CLODI
Putative drug/sodium antiporter, MATE family {ECO:0000313|EMBL:CCL22399.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative drug/sodium antiporter, MATE family
L2_019_000G1_scaffold_441_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30627..32039
DNA (1413bp) protein (471aa)
Citrate transporter family protein n=44 Tax=Clostridium difficile RepID=T3AYW2_CLODI
sodium:sulfate symporter
Putative sodium:sulfate symporter {ECO:0000313|EMBL:CBE05010.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_019_000G1_scaffold_441_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32161..32835)
DNA (675bp) protein (225aa)
putative transaldolase C-like (EC:2.2.1.2)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Fructose-6-phosphate aldolase n=146 Tax=Clostridium difficile RepID=T3GIM9_CLODC
L2_019_000G1_scaffold_441_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33109..33873
DNA (765bp) protein (255aa)
Transcriptional regulator, DeoR family n=181 Tax=Clostridium difficile RepID=Q185Q0_CLOD6
DeoR family transcriptional regulator
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:EQH98912.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_019_000G1_scaffold_441_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34162..34383)
DNA (222bp) protein (74aa)
Uncharacterized protein n=164 Tax=Clostridium difficile RepID=C9XJX7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30330.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_019_000G1_scaffold_441_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34784..36061)
DNA (1278bp) protein (426aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Two-component sensor histidine kinase n=158 Tax=Clostridium difficile RepID=Q185Q2_CLOD6
Two-component sensor histidine kinase
Displaying items 1-30 of 36 in total

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