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L2_019_000G1_scaffold_443

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_443_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(992..1402)
DNA (411bp) protein (137aa)
Uncharacterized protein n=79 Tax=Clostridium difficile RepID=U3XQJ2_CLODI
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:EQG77265.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_019_000G1_scaffold_443_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1618..3000)
DNA (1383bp) protein (461aa)
BlaR1 peptidase M56 family protein n=43 Tax=Clostridium difficile RepID=T2VGV3_CLODI
putative penicillin-binding peptidaseBlaR1-like,M56 family
Penicillin-binding protein {ECO:0000313|EMBL:CKH67499.1}; Putative penicillin-binding peptidaseBlaR1-like,M56 family {ECO:0000313|EMBL:CEJ97080.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_019_000G1_scaffold_443_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3011..3370)
DNA (360bp) protein (120aa)
Penicillinase repressor family protein n=204 Tax=Clostridium difficile RepID=C9XKI8_CLODC
penicillin-binding protein repressor
Transcriptional regulator, beta-lactams repressor {ECO:0000313|EMBL:CCK96456.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
L2_019_000G1_scaffold_443_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3575..4372)
DNA (798bp) protein (266aa)
Uncharacterized protein n=48 Tax=Clostridium difficile RepID=T2WCX3_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE02286.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_019_000G1_scaffold_443_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4815..5426)
DNA (612bp) protein (204aa)
Uncharacterized protein n=201 Tax=Clostridium difficile RepID=Q188Y7_CLOD6
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:CCL32373.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_019_000G1_scaffold_443_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5518..6507)
DNA (990bp) protein (330aa)
putative ornithine cyclodeaminase (EC:4.3.1.12)
Oxidoreductase , NAD-binding Rossmann fold family protein n=45 Tax=Clostridium difficile RepID=T2VFY3_CLODI
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:EQE69571.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_443_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6574..7437)
DNA (864bp) protein (288aa)
Uncharacterized protein n=163 Tax=Clostridium difficile RepID=C9XKI4_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG78004.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_019_000G1_scaffold_443_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7543..8139)
DNA (597bp) protein (199aa)
protein-glutamate methylesterase (EC:3.1.1.61)
Chemotaxis-like protein-glutamate methylesterase {ECO:0000313|EMBL:CKH67710.1}; EC=3.1.1.61 {ECO:0000313|EMBL:CKH67710.1};; Uncharacterized protein {ECO:0000313|EMBL:CDS83696.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Uncharacterized protein n=80 Tax=Clostridium difficile RepID=Q188Y9_CLOD6
L2_019_000G1_scaffold_443_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8179..8982)
DNA (804bp) protein (268aa)
cheR; Methyl-accepting chemotaxis proteinsmethyltransferase, MCP family (EC:2.1.1.80)
Methyltransferase domain protein n=43 Tax=Clostridium difficile RepID=T2VH19_CLODI
CheR methyltransferase, SAM binding domain protein {ECO:0000313|EMBL:EHJ34816.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_019_000G1_scaffold_443_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9018..9458)
DNA (441bp) protein (147aa)
CheW-like domain protein n=182 Tax=Clostridium difficile RepID=C9XKI1_CLODC
chemotaxis protein
Chemotaxis protein CheW {ECO:0000313|EMBL:CCL24625.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_019_000G1_scaffold_443_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9471..11603)
DNA (2133bp) protein (711aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Chemotaxis protein CheA n=37 Tax=Clostridium difficile RepID=U3YSD8_CLODI
cheA; chemotaxis protein
L2_019_000G1_scaffold_443_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11834..13537)
DNA (1704bp) protein (568aa)
Methyl-accepting chemotaxis (MCP) signaling domain protein n=205 Tax=Clostridium difficile RepID=T3IBU4_CLODC
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:EQG77946.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative methyl-accepting chemotaxisreceptor,MCP family
L2_019_000G1_scaffold_443_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13563..14522)
DNA (960bp) protein (320aa)
Diguanylate cyclase domain protein n=194 Tax=Clostridium difficile RepID=T3ID58_CLODC
putative CheY-like chemosensory protein
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQG77763.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_019_000G1_scaffold_443_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14658..15176)
DNA (519bp) protein (173aa)
CheW-like domain protein n=65 Tax=Clostridium difficile RepID=T2VG63_CLODI
Chemotaxis protein {ECO:0000313|EMBL:CDS83777.1}; Purine-binding chemotaxis protein CheW {ECO:0000313|EMBL:CDS83682.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
cheW; chemotaxis protein
L2_019_000G1_scaffold_443_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15219..15704)
DNA (486bp) protein (162aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Clostridium difficile CD69 RepID=T3AFB3_CLODI
chemotaxis protein
L2_019_000G1_scaffold_443_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15701..16222)
DNA (522bp) protein (174aa)
Chemotaxis protein CheY-P phosphatase CheC {ECO:0000313|EMBL:CCL32325.1}; EC=3.-.-.- {ECO:0000313|EMBL:CCL32325.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Chemotaxis protein CheC n=151 Tax=Clostridium difficile RepID=C9XKH5_CLODC
cheC; chemotaxis protein CheC
L2_019_000G1_scaffold_443_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16383..16745)
DNA (363bp) protein (121aa)
Chemotaxis protein CheY n=138 Tax=Clostridium difficile RepID=T3IBT8_CLODC
cheY; chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:EQG78035.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_019_000G1_scaffold_443_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17489..17986)
DNA (498bp) protein (166aa)
GyrI-like small molecule binding domain protein n=97 Tax=Clostridium difficile RepID=T2V0D2_CLODI
putative transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:CKH68156.1}; Putative transcriptional regulator {ECO:0000313|EMBL:CEJ97064.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_019_000G1_scaffold_443_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18161..19072)
DNA (912bp) protein (304aa)
DeoR-family transcriptional regulator n=200 Tax=Clostridium difficile RepID=C9XKH2_CLODC
DeoR family transcriptional regulator
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:EQG77747.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_019_000G1_scaffold_443_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19997..20848
DNA (852bp) protein (284aa)
Uncharacterized protein n=182 Tax=Clostridium difficile RepID=G6BX77_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL32275.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_019_000G1_scaffold_443_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20852..21322
DNA (471bp) protein (157aa)
Uncharacterized protein n=213 Tax=Clostridium difficile RepID=D5Q0B8_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL00456.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L2_019_000G1_scaffold_443_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21335..22645
DNA (1311bp) protein (437aa)
Amidohydrolase family protein n=164 Tax=Clostridium difficile RepID=T2TNI6_CLODI
amidohydrolase
Amidohydrolase family protein {ECO:0000313|EMBL:EQE69600.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_443_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22857..23603
DNA (747bp) protein (249aa)
Metallo-beta-lactamase superfamily protein n=56 Tax=Clostridium difficile RepID=T2TNW2_CLODI
Metallo-beta-lactamase superfamily hydrolase {ECO:0000313|EMBL:CDS83757.1}; Putative beta-lactamase-like hydrolase {ECO:0000313|EMBL:CDT24976.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
metallo-beta-lactamase
L2_019_000G1_scaffold_443_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23965..25506
DNA (1542bp) protein (514aa)
C4-dicarboxylate anaerobic carrier family protein n=145 Tax=Clostridium difficile RepID=T2TPM3_CLODI
aminobenzoyl-glutamate transporter
Putative aminobenzoyl-glutamate transporter {ECO:0000313|EMBL:CBE02250.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_019_000G1_scaffold_443_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25541..26647
DNA (1107bp) protein (369aa)
Peptidase T-like protein {ECO:0000313|EMBL:CDS83753.1}; Putative peptidase, M20 family {ECO:0000313|EMBL:CDT24996.1}; EC=3.4.11.- {ECO:0000313|EMBL:CDT24996.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
M42 glutamyl aminopeptidase family protein n=57 Tax=Clostridium difficile RepID=T2TRI6_CLODI
peptidase
L2_019_000G1_scaffold_443_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26978..28264)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=167 Tax=Clostridium difficile RepID=T3IIF9_CLODC
putative transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EQG77556.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_019_000G1_scaffold_443_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28387..31485)
DNA (3099bp) protein (1033aa)
Diguanylate cyclase domain protein n=42 Tax=Clostridium difficile RepID=T2VG69_CLODI
Putative signaling protein {ECO:0000313|EMBL:CCL24401.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative signaling protein
L2_019_000G1_scaffold_443_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32174..32362
DNA (189bp) protein (63aa)
Putative membrane protein n=97 Tax=Clostridium difficile RepID=T2WEG3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ28337.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
conserved hypothetical protein
L2_019_000G1_scaffold_443_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32508..32621)
DNA (114bp) protein (38aa)
Uncharacterized protein n=18 Tax=Clostridium difficile RepID=T2VW46_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE69566.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_443_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32655..33359)
DNA (705bp) protein (235aa)
Response regulator n=202 Tax=Clostridium difficile RepID=C9XKG3_CLODC
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CDT25038.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Displaying items 1-30 of 37 in total

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