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L2_019_000G1_scaffold_447

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_447_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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191..577
DNA (387bp) protein (129aa)
NADH-flavin oxidoreductase, Old yellow enzyme family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MPJ5_9CLOT
NADH-flavin oxidoreductase, Old yellow enzyme family
NADH-flavin oxidoreductase, Old yellow enzyme family {ECO:0000313|EMBL:AGF58143.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_000G1_scaffold_447_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(996..2432)
DNA (1437bp) protein (479aa)
Sugar (And other) transporter family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W9J0_CLOBI
Sugar (And other) transporter family protein {ECO:0000313|EMBL:EQK49542.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
MFS family transporter protein
L2_019_000G1_scaffold_447_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2769..3920
DNA (1152bp) protein (384aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030C8AD7
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:AJG99311.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_019_000G1_scaffold_447_4
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3913..4776
DNA (864bp) protein (288aa)
glycerol-3-phosphate ABC transporter permease n=1 Tax=Clostridium beijerinckii RepID=UPI0002F50704
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:AJG99312.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_019_000G1_scaffold_447_5
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4776..5675
DNA (900bp) protein (300aa)
ABC transporter permease n=1 Tax=Clostridium beijerinckii RepID=UPI0002EDC5AC
Sugar permease {ECO:0000313|EMBL:AJG99313.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_019_000G1_scaffold_447_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5816..7171
DNA (1356bp) protein (452aa)
ABC transporter substrate-binding protein n=1 Tax=Clostridium beijerinckii RepID=UPI0003140CAD
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AJG99314.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_019_000G1_scaffold_447_7
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7281..8009
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002DA9C09
Glycerophosphoryl diester phosphodiesterase family protein {ECO:0000313|EMBL:AJG99315.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
glycerophosphoryl diester phosphodiesterase
L2_019_000G1_scaffold_447_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8262..9575)
DNA (1314bp) protein (438aa)
UPI0003D68BDB related cluster n=1 Tax=unknown RepID=UPI0003D68BDB
Transcriptional regulator {ECO:0000313|EMBL:ETI88083.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
transcriptional regulator
L2_019_000G1_scaffold_447_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9965..10066
DNA (102bp) protein (34aa)
UPI0003D665F2 related cluster n=1 Tax=unknown RepID=UPI0003D665F2
Uncharacterized protein {ECO:0000313|EMBL:ETI88084.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_019_000G1_scaffold_447_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10232..10429
DNA (198bp) protein (66aa)
UPI0003D5B501 related cluster n=1 Tax=unknown RepID=UPI0003D5B501
Na+/solute symporter {ECO:0000313|EMBL:ETI88085.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_019_000G1_scaffold_447_11
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10646..11620
DNA (975bp) protein (325aa)
Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MX26_9CLOT
permease of the drug/metabolite transporter (DMT) superfamily
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:AGF59126.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_000G1_scaffold_447_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11690..12934
DNA (1245bp) protein (415aa)
codA; cytosine deaminase (EC:3.5.4.1)
Cytosine deaminase {ECO:0000313|EMBL:EDT73063.1}; EC=3.5.4.1 {ECO:0000313|EMBL:EDT73063.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Cytosine deaminase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ70_CLOPF
L2_019_000G1_scaffold_447_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13200..13517
DNA (318bp) protein (106aa)
MazG nucleotide pyrophosphohydrolase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LX62_CLOB8
MazG nucleotide pyrophosphohydrolase
MazG nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:ABR34942.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_019_000G1_scaffold_447_14
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(13607..13990)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7VBY4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:ERT68298.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
HxlR family transcriptional regulator
L2_019_000G1_scaffold_447_15
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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14106..14624
DNA (519bp) protein (173aa)
Intracellular protease/amidase n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DES4_9BACL
Intracellular protease/amidase {ECO:0000313|EMBL:EMT51922.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
peptidase
L2_019_000G1_scaffold_447_16
unknown

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comp(14522..14734)
DNA (213bp) protein (71aa)

This feature has no annotations

L2_019_000G1_scaffold_447_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15036..15734
DNA (699bp) protein (233aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EF91_CLOPA
tlpC; methyl-accepting chemotaxis protein TlpC
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:AIY80543.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_019_000G1_scaffold_447_18
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16282..18384
DNA (2103bp) protein (701aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYG4_9CLOT
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EEG74892.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Cell division protein FtsI/penicillin-binding protein 2
L2_019_000G1_scaffold_447_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18527..19930
DNA (1404bp) protein (468aa)
ytjP; putative dipeptidase YtjP (EC:3.4.13.-)
Dipeptidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6T3_CLOBU
Peptidase M20 {ECO:0000313|EMBL:KHD17068.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_019_000G1_scaffold_447_20
unknown

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comp(19899..20135)
DNA (237bp) protein (79aa)

This feature has no annotations

L2_019_000G1_scaffold_447_21
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20343..21839)
DNA (1497bp) protein (499aa)
Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I3I7_CLOCE
AraC family transcriptional regulator
Two component transcriptional regulator, AraC family {ECO:0000313|EMBL:ACL76330.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L2_019_000G1_scaffold_447_22
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21820..22686)
DNA (867bp) protein (289aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T9E0_9CLOT
sensor with HAMP domain
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EGD49122.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
L2_019_000G1_scaffold_447_23
unknown

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comp(22644..23570)
DNA (927bp) protein (309aa)

This feature has no annotations

L2_019_000G1_scaffold_447_24
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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23691..24998
DNA (1308bp) protein (436aa)
family 1 extracellular solute-binding protein n=1 Tax=Paenibacillus elgii RepID=UPI000248E0E2
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEQ24608.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
extracellular solute-binding protein
L2_019_000G1_scaffold_447_25
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25080..26048
DNA (969bp) protein (323aa)
binding-protein-dependent transport system inner membrane component n=1 Tax=Paenibacillus elgii RepID=UPI000248E0E3
ABC transporter permease {ECO:0000313|EMBL:KEQ24607.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
ABC transporter
L2_019_000G1_scaffold_447_26
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26060..26896
DNA (837bp) protein (279aa)
ABC-type sugar transport system, permease component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FIT5_9CLOT
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EMS71612.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
binding-protein-dependent transport systems inner membrane component
L2_019_000G1_scaffold_447_27
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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26931..28934
DNA (2004bp) protein (668aa)
Beta-galactosidase trimerisation domain protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZVQ2_MAHA5
beta-galactosidase trimerisation domain-containing protein
Beta-galactosidase trimerisation domain protein {ECO:0000313|EMBL:AEE97446.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L2_019_000G1_scaffold_447_28
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28951..29829
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WCQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00660.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Transcriptional regulators of NagC/XylR family
L2_019_000G1_scaffold_447_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29898..30140
DNA (243bp) protein (81aa)
UPI0003D5CE06 related cluster n=1 Tax=unknown RepID=UPI0003D5CE06
Cytosine deaminase {ECO:0000313|EMBL:ETI88087.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
putative cytosine deaminase
L2_019_000G1_scaffold_447_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30353..31675
DNA (1323bp) protein (441aa)
adenine permease n=1 Tax=Clostridium botulinum RepID=UPI0002EDCCA1
Putative integral membrane transport protein {ECO:0000313|EMBL:CDH90878.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
xanthine/uracil permease family protein
Displaying items 1-30 of 38 in total

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