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L2_019_000G1_scaffold_449

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_449_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(279..776)
DNA (498bp) protein (166aa)
Phosphatidylethanolamine-binding family protein n=198 Tax=Clostridium difficile RepID=C9XR85_CLODC
phosphatidylethanolamine-binding regulatory protein
Phosphatidylethanolamine-binding family protein {ECO:0000313|EMBL:EQI76431.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L2_019_000G1_scaffold_449_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(882..1244)
DNA (363bp) protein (121aa)
HxlR-like helix-turn-helix family protein n=140 Tax=Clostridium difficile RepID=T3G4A2_CLODC
HxlR family transcriptional regulator
Transcriptional regulator, hxlR family {ECO:0000313|EMBL:CAJ70062.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_019_000G1_scaffold_449_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1262..1876)
DNA (615bp) protein (205aa)
Uncharacterized protein n=39 Tax=Clostridium difficile RepID=T2UTY8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE59715.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L2_019_000G1_scaffold_449_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2469..4604
DNA (2136bp) protein (712aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
rnr; ribonuclease R (EC:3.1.-.-)
Ribonuclease R n=121 Tax=Clostridium difficile RepID=T3G1R2_CLODC
L2_019_000G1_scaffold_449_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5824..6315
DNA (492bp) protein (164aa)
Uncharacterized protein n=65 Tax=Clostridium difficile RepID=G6BPN6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL23570.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
conserved hypothetical protein
L2_019_000G1_scaffold_449_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6844..7716
DNA (873bp) protein (291aa)
ABC-type transport system, multidrug-familyATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=140 Tax=Clostridium difficile RepID=T3G842_CLODC
ABC transporter family protein {ECO:0000313|EMBL:EQG74557.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_019_000G1_scaffold_449_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7713..9002
DNA (1290bp) protein (430aa)
ABC-2 transporter family protein n=45 Tax=Clostridium difficile RepID=T2URK9_CLODI
multidrug family ABC transporter permease
ABC-type transport system, multidrug-family permease {ECO:0000313|EMBL:CAJ70057.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_019_000G1_scaffold_449_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9031..9576
DNA (546bp) protein (182aa)
ABC-type transport system, multidrug-family permease n=2 Tax=Clostridium difficile RepID=U4D2Q5_CLODI
multidrug family ABC transporter permease
Putative membrane protein {ECO:0000313|EMBL:EQE59767.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_449_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9843..10046)
DNA (204bp) protein (68aa)
Acetyltransferase family protein n=2 Tax=Clostridium difficile RepID=T4P9S6_CLODI
Acetyltransferase, GNAT family {ECO:0000313|EMBL:CDS89734.1}; Putative FemA-like peptidoglycan biosynthesis protein {ECO:0000313|EMBL:CDS89125.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
acetyltransferase
L2_019_000G1_scaffold_449_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10064..10306)
DNA (243bp) protein (81aa)
Acetyltransferase family protein n=33 Tax=Clostridium difficile RepID=T3G6P1_CLODC
putative FemA-like peptidoglycan biosynthesisprotein
Acetyltransferase {ECO:0000313|EMBL:CKG81978.1}; Putative FemA-like peptidoglycan biosynthesisprotein {ECO:0000313|EMBL:CEJ99808.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_019_000G1_scaffold_449_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11306..12133)
DNA (828bp) protein (276aa)
Mitochondria biogenesis AIM24 family protein n=88 Tax=Clostridium difficile RepID=T3G500_CLODC
Transcriptional regulator, TRAP family
Mitochondria biogenesis AIM24 family protein {ECO:0000313|EMBL:EQE59779.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_449_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12724..13215
DNA (492bp) protein (164aa)
SsrA-binding protein n=213 Tax=Clostridium difficile RepID=SSRP_CLOD6
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_019_000G1_scaffold_449_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13837..15864
DNA (2028bp) protein (676aa)
N-6 DNA Methylase family protein n=30 Tax=Clostridium difficile RepID=T2UXC4_CLODI
N-6 DNA Methylase {ECO:0000313|EMBL:EHJ32229.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
N-6 DNA methylase
L2_019_000G1_scaffold_449_14
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15864..17255
DNA (1392bp) protein (464aa)
Type I restriction modification DNA specificity domain protein n=29 Tax=Clostridium difficile RepID=T2UU23_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EOS71454.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
restriction modification system DNA specificity subunit
L2_019_000G1_scaffold_449_15
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17317..18588
DNA (1272bp) protein (424aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=T2UVK4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EOO70455.1}; TaxID=1053224 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD021.;"
hypothetical protein
L2_019_000G1_scaffold_449_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18623..21604
DNA (2982bp) protein (994aa)
DEAD/DEAH box helicase family protein n=29 Tax=Clostridium difficile RepID=T2UUY5_CLODI
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:EQG74444.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
type III restriction protein, res subunit
L2_019_000G1_scaffold_449_17
unknown

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comp(21663..21833)
DNA (171bp) protein (57aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=T2UUM1_CLODI
L2_019_000G1_scaffold_449_18
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22114..22449
DNA (336bp) protein (112aa)
Uncharacterized protein n=29 Tax=Clostridium difficile RepID=T2UKQ1_CLODI
Uncharacterised protein {ECO:0000313|EMBL:CEQ15121.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L2_019_000G1_scaffold_449_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22513..22650
DNA (138bp) protein (46aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=T2UL94_CLODI
DNA repair protein RadC family protein {ECO:0000313|EMBL:EHJ32221.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_019_000G1_scaffold_449_20
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22679..22864
DNA (186bp) protein (62aa)
RadC-like JAB domain protein n=30 Tax=Clostridium difficile RepID=T2UM92_CLODI
DNA repair protein RadC {ECO:0000313|EMBL:CEP85340.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
radC; DNA repair protein RadC
L2_019_000G1_scaffold_449_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23111..23404
DNA (294bp) protein (98aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=T2UNU9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ00433.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L2_019_000G1_scaffold_449_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23431..24027
DNA (597bp) protein (199aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=T2ULE4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ32219.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L2_019_000G1_scaffold_449_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24180..24449
DNA (270bp) protein (90aa)
Mor transcription activator family protein n=30 Tax=Clostridium difficile RepID=T4LM09_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ32218.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Mor transcription activator family.
L2_019_000G1_scaffold_449_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24475..24717
DNA (243bp) protein (81aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=U3YYQ9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS90172.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_019_000G1_scaffold_449_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24923..26056
DNA (1134bp) protein (378aa)
50S ribosome-binding GTPase family protein n=29 Tax=Clostridium difficile RepID=T2UM88_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEH97846.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
GTP-binding protein
L2_019_000G1_scaffold_449_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26721..27065
DNA (345bp) protein (115aa)
Uncharacterized protein n=28 Tax=Clostridium difficile RepID=T4TL70_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ00440.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
hypothetical protein
L2_019_000G1_scaffold_449_27
unknown

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27076..27165
DNA (90bp) protein (30aa)

This feature has no annotations

L2_019_000G1_scaffold_449_28
unknown

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27184..27273
DNA (90bp) protein (30aa)
Putative membrane protein (Fragment) n=1 Tax=Clostridium difficile Y184 RepID=T4EWY9_CLODI
L2_019_000G1_scaffold_449_29
unknown

Not on your lists

27413..28774
DNA (1362bp) protein (454aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=T2UKP2_CLODI
L2_019_000G1_scaffold_449_30
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28964..29281
DNA (318bp) protein (106aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=T3AVA6_CLODI
Uncharacterised protein {ECO:0000313|EMBL:CEP85330.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Displaying items 1-30 of 46 in total

View Taxonomy