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L2_019_000G1_scaffold_509

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_509_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..104)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3DI39_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF27158.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
L2_019_000G1_scaffold_509_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

149..1366
DNA (1218bp) protein (406aa)
PTS system sugar-specific permease component family protein n=30 Tax=Clostridium difficile RepID=T2V0J8_CLODI
Group I intron
PTS system sugar-specific permease component family protein {ECO:0000313|EMBL:EQE60819.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_509_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1369..2109
DNA (741bp) protein (247aa)
Uncharacterized protein n=94 Tax=Clostridium difficile RepID=G6C080_CLODI
Putative phosphosugar isomerase {ECO:0000313|EMBL:CDT65476.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS88453.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative phosphosugar isomerase
L2_019_000G1_scaffold_509_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2122..2232
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Clostridium difficile (strain 630) RepID=Q182N9_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69438.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_019_000G1_scaffold_509_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2432..3742
DNA (1311bp) protein (437aa)
ABC transporter, solute-binding protein n=6 Tax=Clostridium difficile RepID=G6C079_CLODI
sugar transporter, substrate-binding lipoprotein
Putative sugar transporter, substrate-binding lipoprotein {ECO:0000313|EMBL:CBE05760.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_019_000G1_scaffold_509_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3840..4757
DNA (918bp) protein (306aa)
Binding--dependent transport system inner membrane component family protein n=140 Tax=Clostridium difficile RepID=T3GHX3_CLODC
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQI80547.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
sugar transporter permease
L2_019_000G1_scaffold_509_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4773..5582
DNA (810bp) protein (270aa)
Binding--dependent transport system inner membrane component family protein n=43 Tax=Clostridium difficile RepID=T2V262_CLODI
sugar transporter permease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQG76888.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_019_000G1_scaffold_509_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5640..7388
DNA (1749bp) protein (583aa)
Uncharacterized protein n=44 Tax=Clostridium difficile RepID=T2V0I2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE60824.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
conserved hypothetical protein
L2_019_000G1_scaffold_509_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7692..8672
DNA (981bp) protein (327aa)
Endoglucanase (cellulase) (EC:3.2.1.4)
Endoglucanase (Cellulase) {ECO:0000313|EMBL:CAJ69433.1}; EC=3.2.1.4 {ECO:0000313|EMBL:CAJ69433.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Cellulase n=6 Tax=Clostridium difficile RepID=G6C075_CLODI
L2_019_000G1_scaffold_509_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8677..10983
DNA (2307bp) protein (769aa)
bcsA; Cellulose synthase catalytic subunit(UDP-forming) (EC:2.4.1.12)
Glycosyltransferase, group 2 family protein n=63 Tax=Clostridium difficile RepID=G6C074_CLODI
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EQH98508.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_019_000G1_scaffold_509_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10994..12070
DNA (1077bp) protein (359aa)
Uncharacterized protein n=54 Tax=Clostridium difficile RepID=U3Z0P0_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQE60799.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
conserved hypothetical protein
L2_019_000G1_scaffold_509_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12088..13506
DNA (1419bp) protein (473aa)
Putative membrane-bound 0-ACYL transferase,MBOAT family {ECO:0000313|EMBL:CCL22896.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCL22896.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
membrane-bound O-acyl transferase (EC:2.3.1.-)
MBOAT, membrane-bound O-acyltransferase family protein n=87 Tax=Clostridium difficile RepID=T4ALQ2_CLODI
L2_019_000G1_scaffold_509_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13521..14729
DNA (1209bp) protein (403aa)
Uncharacterized protein n=132 Tax=Clostridium difficile RepID=T3GEF3_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69429.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_019_000G1_scaffold_509_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14803..16191)
DNA (1389bp) protein (463aa)
Dicarboxylate family transmembrane symporter n=91 Tax=Clostridium difficile RepID=T2TCC3_CLODI
Dicarboxylate family transmembrane symporter {ECO:0000313|EMBL:EQI80539.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
sodium:glutamate/aspartate symporter family protein
L2_019_000G1_scaffold_509_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16532..17866
DNA (1335bp) protein (445aa)
coenzyme A disulfide reductase (EC:1.8.1.14)
Pyridine nucleotide-disulfide oxidoreductase family protein n=109 Tax=Clostridium difficile RepID=T3GHY3_CLODC
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:EQE60806.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_019_000G1_scaffold_509_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18008..18925)
DNA (918bp) protein (306aa)
rnz; Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3endonuclease) (EC:3.1.26.11)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Ribonuclease Z n=196 Tax=Clostridium difficile RepID=RNZ_CLOD6
L2_019_000G1_scaffold_509_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19133..20017
DNA (885bp) protein (295aa)
Uncharacterized protein n=104 Tax=Clostridium difficile RepID=G6C067_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE60814.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative lipoprotein
L2_019_000G1_scaffold_509_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20230..22071
DNA (1842bp) protein (614aa)
Putative membrane-associated 5'-nucleotidase/phosphoesterase {ECO:0000313|EMBL:CCL22890.1}; EC=3.1.3.5 {ECO:0000313|EMBL:CCL22890.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative membrane-associated5'-nucleotidase/phosphoesterase (EC:3.1.3.5)
Calcineurin-like phosphoesterase family protein n=41 Tax=Clostridium difficile RepID=T2V115_CLODI
L2_019_000G1_scaffold_509_19
unknown

Not on your lists

comp(22034..22234)
DNA (201bp) protein (67aa)

This feature has no annotations

L2_019_000G1_scaffold_509_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22355..23083
DNA (729bp) protein (243aa)
Two-component response regulator n=193 Tax=Clostridium difficile RepID=C9XMQ6_CLODC
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CBE05735.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_019_000G1_scaffold_509_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23077..24387
DNA (1311bp) protein (437aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=105 Tax=Clostridium difficile RepID=G6C064_CLODI
two-component sensor histidine kinase
L2_019_000G1_scaffold_509_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24504..25187
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKH35778.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH35778.1};; ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CDT65700.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDT65700.1};; Uncharacterized protein {ECO:0000313|EMBL:CDS88421.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ABC-type transport system, ATP-binding protein n=106 Tax=Clostridium difficile RepID=Q182M1_CLOD6
L2_019_000G1_scaffold_509_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25180..27567
DNA (2388bp) protein (796aa)
FtsX-like permease family protein n=6 Tax=Clostridium difficile RepID=T3VRY8_CLODI
ABC-type transport system, permease {ECO:0000313|EMBL:CCL22872.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC-type transport system, permease
L2_019_000G1_scaffold_509_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27847..28989
DNA (1143bp) protein (381aa)
alanine--glyoxylate transaminase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:CKH35714.1}; EC=1.12.-.- {ECO:0000313|EMBL:CKH35714.1};; Aminotransferase, alanine--glyoxylatetransaminase {ECO:0000313|EMBL:CEJ99155.1}; EC=2.6.1.- {ECO:0000313|EMBL:CEJ99155.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Aminotransferase class-V family protein n=54 Tax=Clostridium difficile RepID=T3GDJ9_CLODC
L2_019_000G1_scaffold_509_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29008..29532
DNA (525bp) protein (175aa)
ECF-type riboflavin transporter, S component family protein n=68 Tax=Clostridium difficile RepID=T2TH29_CLODI
membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ69418.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_019_000G1_scaffold_509_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29632..30450
DNA (819bp) protein (273aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=63 Tax=Clostridium difficile RepID=T2THS1_CLODI
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQH98493.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Transcriptional regulator, AraC family
L2_019_000G1_scaffold_509_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30528..30839
DNA (312bp) protein (104aa)
Uncharacterized protein n=162 Tax=Clostridium difficile RepID=C9XMP9_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ24631.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_019_000G1_scaffold_509_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30966..32969)
DNA (2004bp) protein (668aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Alpha amylase, catalytic domain protein n=43 Tax=Clostridium difficile RepID=T2V284_CLODI
gbeA; glycogen branching enzyme
L2_019_000G1_scaffold_509_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33122..33760)
DNA (639bp) protein (213aa)
Regulatory protein RecX n=181 Tax=Clostridium difficile RepID=RECX_CLOD6
recX; Regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_019_000G1_scaffold_509_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34036..34725
DNA (690bp) protein (230aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Probable nicotinate-nucleotide adenylyltransferase n=216 Tax=Clostridium difficile RepID=C9XMP6_CLODC
nicotinate-nucleotide adenylyltransferase
Displaying items 1-30 of 35 in total

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