ggKbase home page

L2_019_000G1_scaffold_513

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_513_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..444)
DNA (444bp) protein (148aa)
SH3 domain protein n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABD3_9FIRM
SH3 domain protein {ECO:0000313|EMBL:EDQ95916.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L2_019_000G1_scaffold_513_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(669..1250)
DNA (582bp) protein (194aa)
VanZ-like protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABD2_9FIRM
VanZ-like protein {ECO:0000313|EMBL:EDQ95915.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
VanZ family protein
L2_019_000G1_scaffold_513_3
Streptococcus sp. DORA_10, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1532..1882)
DNA (351bp) protein (117aa)
UPI0003D662E3 related cluster n=1 Tax=unknown RepID=UPI0003D662E3
Uncharacterized protein {ECO:0000313|EMBL:ETI96650.1}; TaxID=1403937 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. DORA_10.;"
L2_019_000G1_scaffold_513_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1891..2316)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95906.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L2_019_000G1_scaffold_513_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3053..3436)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Clostridium bartlettii CAG:1329 RepID=R5XBH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09754.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_019_000G1_scaffold_513_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3642..4301
DNA (660bp) protein (220aa)
Cation diffusion facilitator family transporter n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABC0_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EDQ95903.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
cation diffusion facilitator family transporter
L2_019_000G1_scaffold_513_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4395..4745
DNA (351bp) protein (117aa)
UPI0003D60002 related cluster n=1 Tax=unknown RepID=UPI0003D60002
Uncharacterized protein {ECO:0000313|EMBL:ETI96959.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L2_019_000G1_scaffold_513_8

Not on your lists

comp(4803..5315)
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ38098.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_019_000G1_scaffold_513_9

Not on your lists

comp(5428..6507)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ38097.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_019_000G1_scaffold_513_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6614..7672)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95900.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L2_019_000G1_scaffold_513_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7890..9086)
DNA (1197bp) protein (399aa)
Nucleoside transporter, NupC family n=2 Tax=Clostridiales RepID=B0ABB6_9FIRM
Nucleoside transporter, NupC family {ECO:0000313|EMBL:EDQ95899.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
nucleoside permease NupC
L2_019_000G1_scaffold_513_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9212..9889
DNA (678bp) protein (226aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABB5_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDQ95898.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
cyclic nucleotide-binding domain-containing protein
L2_019_000G1_scaffold_513_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10162..11859)
DNA (1698bp) protein (566aa)
UPI0003D5DC00 related cluster n=1 Tax=unknown RepID=UPI0003D5DC00
Uncharacterized protein {ECO:0000313|EMBL:ETI96966.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
pgm1; phosphoglucomutase
L2_019_000G1_scaffold_513_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12306..12482)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ABB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09759.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_019_000G1_scaffold_513_15
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12556..13197)
DNA (642bp) protein (214aa)
ATPase AAA n=1 Tax=Clostridium sp. BL8 RepID=T0NJP6_9CLOT
ATPase AAA {ECO:0000313|EMBL:EQB90295.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
putative ATPase
L2_019_000G1_scaffold_513_16
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14122..15414
DNA (1293bp) protein (431aa)
UPI0003D6585E related cluster n=1 Tax=unknown RepID=UPI0003D6585E
Uncharacterized protein {ECO:0000313|EMBL:ETI94288.1}; Flags: Fragment;; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
transposase
L2_019_000G1_scaffold_513_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15724..17406)
DNA (1683bp) protein (561aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Acetolactate synthase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABB0_9FIRM
acetolactate synthase large subunit
L2_019_000G1_scaffold_513_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17738..18727)
DNA (990bp) protein (330aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D612D6 related cluster n=1 Tax=unknown RepID=UPI0003D612D6
ketol-acid reductoisomerase
L2_019_000G1_scaffold_513_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19108..19326)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ABA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09952.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_019_000G1_scaffold_513_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19886..20668)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95889.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
conserved hypothetical protein
L2_019_000G1_scaffold_513_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20672..22018)
DNA (1347bp) protein (449aa)
Transporter n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABA5_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sodium- and chloride- dependent transporter
L2_019_000G1_scaffold_513_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22361..23326
DNA (966bp) protein (322aa)
UPI0003D6856A related cluster n=1 Tax=unknown RepID=UPI0003D6856A
Uncharacterized protein {ECO:0000313|EMBL:ETI94281.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L2_019_000G1_scaffold_513_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23736..24314)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XZR4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09957.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_019_000G1_scaffold_513_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24466..25035)
DNA (570bp) protein (190aa)
HDIG domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X2I7_9CLOT
HDIG domain protein {ECO:0000313|EMBL:CDA09958.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
metal dependent phosphohydrolase
L2_019_000G1_scaffold_513_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25386..26312)
DNA (927bp) protein (309aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
peptidyl-prolyl isomerase (EC:5.2.1.8)
UPI0003D5F177 related cluster n=1 Tax=unknown RepID=UPI0003D5F177
L2_019_000G1_scaffold_513_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26358..27155)
DNA (798bp) protein (266aa)
Polysaccharide deacetylase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X598_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:CDA09960.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
polysaccharide deacetylase
L2_019_000G1_scaffold_513_27
Streptococcus sp. DORA_10, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27454..27810)
DNA (357bp) protein (119aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1403937 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. DORA_10.;"
hisI; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
UPI0003D64750 related cluster n=1 Tax=unknown RepID=UPI0003D64750
L2_019_000G1_scaffold_513_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27905..28663)
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XZS1_9CLOT
hisF; imidazole glycerol phosphate synthase subunit
L2_019_000G1_scaffold_513_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28657..29370)
DNA (714bp) protein (238aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AB95_9FIRM
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methyliden eamino] imidazole-4-carboxamide isomerase
L2_019_000G1_scaffold_513_30

Not on your lists

comp(29364..29975)
DNA (612bp) protein (204aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XC42_9CLOT
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000313|EMBL:ETJ16977.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying items 1-30 of 39 in total

View Taxonomy