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L2_019_000G1_scaffold_568

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_568_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1101)
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33692.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_019_000G1_scaffold_568_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1200..1631)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33693.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_019_000G1_scaffold_568_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1839..2771)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XET4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45954.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_019_000G1_scaffold_568_4
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2771..4183)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Clostridium saccharoperbutylacetonicum RepID=UPI00036A7017
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57221.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_000G1_scaffold_568_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4259..5995)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01003.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_019_000G1_scaffold_568_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(6336..12950)
DNA (6615bp) protein (2205aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HDD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27508.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Hypothetical protein
L2_019_000G1_scaffold_568_7
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(13115..13981)
DNA (867bp) protein (289aa)
Phage integrase SAM-like domain protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HMV2_9FIRM
Phage integrase SAM-like domain protein {ECO:0000313|EMBL:CCY26097.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L2_019_000G1_scaffold_568_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14268..15113)
DNA (846bp) protein (282aa)
Phage integrase, SAM-like domain protein n=2 Tax=Oscillibacter RepID=U2QDB5_9FIRM
Phage integrase, SAM-like domain protein {ECO:0000313|EMBL:ERK63272.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
integrase family protein
L2_019_000G1_scaffold_568_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15341..16036)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33694.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_019_000G1_scaffold_568_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16043..16573)
DNA (531bp) protein (177aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD0_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO33695.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_019_000G1_scaffold_568_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16899..17117)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33696.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_019_000G1_scaffold_568_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17584..17883)
DNA (300bp) protein (100aa)
Toxin-antitoxin system, antitoxin component, Xre domain protein n=2 Tax=Oscillibacter RepID=U2R014_9FIRM
Toxin-antitoxin system, antitoxin component, Xre domain protein {ECO:0000313|EMBL:ERK64863.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Predicted transcriptional regulators
L2_019_000G1_scaffold_568_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18034..19212
DNA (1179bp) protein (393aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33698.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
mandelate racemase
L2_019_000G1_scaffold_568_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19295..20746
DNA (1452bp) protein (484aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33699.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Amino acid transporters
L2_019_000G1_scaffold_568_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20778..21980
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33700.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
mandelate racemase
L2_019_000G1_scaffold_568_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22026..23231
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33701.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
L2_019_000G1_scaffold_568_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23319..24536
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33702.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_019_000G1_scaffold_568_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24608..24850)
DNA (243bp) protein (81aa)
DNA-binding helix-turn-helix protein n=1 Tax=Anaerotruncus colihominis DSM 17241 PF31_9FIRM">RepID=B0PF31_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS09964.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
helix-turn-helix domain-containing protein
L2_019_000G1_scaffold_568_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25038..25649
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33704.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_019_000G1_scaffold_568_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25646..26059
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33705.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_019_000G1_scaffold_568_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26362..27498
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33706.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_019_000G1_scaffold_568_22
unknown

Not on your lists

27908..28027
DNA (120bp) protein (40aa)

This feature has no annotations

L2_019_000G1_scaffold_568_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28330..30843
DNA (2514bp) protein (838aa)
YD repeat (Two copies) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCX0_9FIRM
YD repeat (Two copies) {ECO:0000313|EMBL:EHO33539.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
YD repeat-containing protein
L2_019_000G1_scaffold_568_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30874..36450
DNA (5577bp) protein (1859aa)
YD repeat (Two copies) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCX0_9FIRM
YD repeat (Two copies) {ECO:0000313|EMBL:EHO33539.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Rhs family protein
Displaying 24 items

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