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L2_019_000G1_scaffold_576

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_576_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1169)
DNA (1167bp) protein (389aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=3 Tax=Lachnospiraceae RepID=A7B6F1_RUMGN
L2_019_000G1_scaffold_576_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1229..2005)
DNA (777bp) protein (259aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B6F2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18163.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_019_000G1_scaffold_576_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2382..2624
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6F4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76487.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_019_000G1_scaffold_576_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2817..3317)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TN20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67040.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_019_000G1_scaffold_576_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3379..4155)
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=A7B6F6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18166.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_019_000G1_scaffold_576_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4301..5365
DNA (1065bp) protein (355aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=4 Tax=Clostridiales RepID=A7B6F7_RUMGN
L2_019_000G1_scaffold_576_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5420..5962)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UDV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67037.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
RNA polymerase sigma factor, sigma-70 family
L2_019_000G1_scaffold_576_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5977..6384)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67036.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L2_019_000G1_scaffold_576_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6564..7295
DNA (732bp) protein (244aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B6G1_RUMGN
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_019_000G1_scaffold_576_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7279..7881)
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BUK2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18171.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L2_019_000G1_scaffold_576_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7933..8727)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67033.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_019_000G1_scaffold_576_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8740..9135)
DNA (396bp) protein (132aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B6G4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49479.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_019_000G1_scaffold_576_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9136..9567)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67031.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Type IV leader peptidase family.
L2_019_000G1_scaffold_576_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9555..10352)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6G6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76499.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_019_000G1_scaffold_576_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10445..11812)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67029.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_019_000G1_scaffold_576_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11814..12017)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B6G8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67028.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_019_000G1_scaffold_576_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12038..13261)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UDU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67027.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_019_000G1_scaffold_576_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13271..13888)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49554.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Flp pilus assembly protein TadB
L2_019_000G1_scaffold_576_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13911..15188)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BTR2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18180.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Flp pilus assembly protein, ATPase CpaF
L2_019_000G1_scaffold_576_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15185..16117)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6H2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76505.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_019_000G1_scaffold_576_21
unknown

Not on your lists

comp(16096..16320)
DNA (225bp) protein (75aa)

This feature has no annotations

L2_019_000G1_scaffold_576_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16356..16565)
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TMS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD18182.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
SigmaK-factor processing regulatory protein BofA.
L2_019_000G1_scaffold_576_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16633..17121)
DNA (489bp) protein (163aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5UDU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49558.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_019_000G1_scaffold_576_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17136..17765)
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uracil phosphoribosyltransferase n=4 Tax=Clostridiales RepID=A7B6H6_RUMGN
uracil phosphoribosyltransferase
L2_019_000G1_scaffold_576_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17765..19336)
DNA (1572bp) protein (524aa)
Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Lachnospiraceae RepID=A7B6H7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49560.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Sua5/YciO/YrdC/YwlC family protein
L2_019_000G1_scaffold_576_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19320..20027)
DNA (708bp) protein (236aa)
N-acetylmuramoyl-L-alanine amidase CwlD n=2 Tax=Lachnospiraceae RepID=V8BUL6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49561.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
cell wall hydrolase/autolysin
L2_019_000G1_scaffold_576_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20121..22046)
DNA (1926bp) protein (642aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BTP8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18187.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L2_019_000G1_scaffold_576_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22228..23163
DNA (936bp) protein (312aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UDU0_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ67017.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_019_000G1_scaffold_576_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23144..23992)
DNA (849bp) protein (283aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7B3_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ67016.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC family transcription regulator
L2_019_000G1_scaffold_576_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24176..25537
DNA (1362bp) protein (454aa)
Glycoside/pentoside/hexuronide transporter n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6I2_RUMGN
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:EDN76515.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
Displaying items 1-30 of 42 in total

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