ggKbase home page

L2_019_000G1_scaffold_588

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_588_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102..986)
DNA (885bp) protein (295aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00093350};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Clostridium perfringens F262 RepID=H7CRH6_CLOPF
L2_019_000G1_scaffold_588_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1149..1718
DNA (570bp) protein (190aa)
Transcriptional regulator, TetR family n=3 Tax=Clostridium perfringens RepID=Q0SWV8_CLOPS
TetR family transcriptional regulator
Probable transcription regulator {ECO:0000313|EMBL:BAB79735.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_588_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1993..3258
DNA (1266bp) protein (422aa)
Hemolysin-related protein n=7 Tax=Clostridium perfringens RepID=H7CRH8_CLOPF
hlyA; hemolysin-like protein
Probable hemolysin-related protein {ECO:0000313|EMBL:BAB79736.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_588_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3261..3692
DNA (432bp) protein (144aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Cytidine/deoxycytidylate deaminase family protein n=2 Tax=Clostridium perfringens RepID=H7CRH9_CLOPF
cytidine/deoxycytidylate deaminase family protein
L2_019_000G1_scaffold_588_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3770..4213
DNA (444bp) protein (148aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRI0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26646.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_019_000G1_scaffold_588_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4337..4702
DNA (366bp) protein (122aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BI24_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80592.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_019_000G1_scaffold_588_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4812..5474
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XPC9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79740.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_588_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5988..7460)
DNA (1473bp) protein (491aa)
UPF0061 protein CPE0035 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Y035_CLOPE
yplC; hypothetical protein
UPF0061 protein CPE0035; ORF 2; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_588_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7791..8987
DNA (1197bp) protein (399aa)
Phospholipase C n=31 Tax=Clostridium perfringens RepID=PHLC1_CLOPE
plc; phospholipase C
Phospholipasae C {ECO:0000313|EMBL:ABA64093.1}; Phospholipase C {ECO:0000313|EMBL:ACF40031.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
L2_019_000G1_scaffold_588_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9175..10101
DNA (927bp) protein (309aa)
CobW/P47K family protein n=3 Tax=Clostridium perfringens RepID=Q0TV30_CLOP1
CobW/P47K family protein
CobW/P47K family protein {ECO:0000313|EMBL:EDT23590.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_019_000G1_scaffold_588_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10121..10705
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XPC7_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79744.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_000G1_scaffold_588_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10708..11601
DNA (894bp) protein (298aa)
Putative permease n=3 Tax=Clostridium perfringens RepID=Q0TV28_CLOP1
permease
Putative permease {ECO:0000313|EMBL:EDT26688.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_019_000G1_scaffold_588_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11614..12333
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RH71_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26651.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_019_000G1_scaffold_588_14
unknown

Not on your lists

comp(12364..12537)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_019_000G1_scaffold_588_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12600..13388
DNA (789bp) protein (263aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Prolipoprotein diacylglyceryl transferase 1 n=4 Tax=Clostridium perfringens RepID=LGT1_CLOPE
L2_019_000G1_scaffold_588_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14130..14663
DNA (534bp) protein (178aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWT5_CLOPS
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABG85874.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_019_000G1_scaffold_588_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15100..16386
DNA (1287bp) protein (429aa)
Branched-chain amino acid transport system II carrier protein n=3 Tax=Clostridium perfringens RepID=Q0TV24_CLOP1
brnQ; branched-chain amino acid transport system II carrier protein
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EDT23600.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_019_000G1_scaffold_588_18
unknown

Not on your lists

comp(16496..16696)
DNA (201bp) protein (67aa)

This feature has no annotations

L2_019_000G1_scaffold_588_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16705..17190)
DNA (486bp) protein (162aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Dihydrofolate reductase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XPC1_CLOPE
folA; dihydrofolate reductase
L2_019_000G1_scaffold_588_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17372..19024
DNA (1653bp) protein (551aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EDT23636.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDT23636.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=2 Tax=Clostridium perfringens RepID=B1R856_CLOPF
L2_019_000G1_scaffold_588_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19136..19474
DNA (339bp) protein (113aa)
Nucleoid-associated protein CPE0046 n=10 Tax=Clostridium perfringens RepID=Y046_CLOPE
hypothetical protein
Nucleoid-associated protein HA1_00225 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_000G1_scaffold_588_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19572..20168
DNA (597bp) protein (199aa)
Recombination protein RecR n=11 Tax=Clostridium perfringens RepID=RECR_CLOP1
recR; recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_019_000G1_scaffold_588_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20394..20672
DNA (279bp) protein (93aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CRJ7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15000.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_019_000G1_scaffold_588_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20688..20966
DNA (279bp) protein (93aa)
Pro-sigmaK processing inhibitor BofA n=7 Tax=Clostridium perfringens RepID=H7CRJ8_CLOPF
bofA; sigma-K factor processing regulatory protein BofA
Sigma-K factor processing regulatory protein BofA {ECO:0000313|EMBL:EDS80563.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_019_000G1_scaffold_588_25
unknown

Not on your lists

comp(20858..21067)
DNA (210bp) protein (70aa)

This feature has no annotations

L2_019_000G1_scaffold_588_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21241..22371
DNA (1131bp) protein (377aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWU5_CLOPS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABG85672.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_019_000G1_scaffold_588_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22534..22713
DNA (180bp) protein (60aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRK0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18731.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_000G1_scaffold_588_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22782..22964
DNA (183bp) protein (61aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XPB3_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15031.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_019_000G1_scaffold_588_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23128..24204
DNA (1077bp) protein (359aa)
Aminotransferase, class V n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWU2_CLOPS
aminotransferase, class V
Aminotransferase, class V {ECO:0000313|EMBL:ABG86262.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_019_000G1_scaffold_588_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24274..25179
DNA (906bp) protein (302aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Clostridium perfringens F262 RepID=H7CRK3_CLOPF
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EIA18734.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
putative D-3-phosphoglycerate dehydrogenase
Displaying items 1-30 of 38 in total

View Taxonomy