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L2_019_000G1_scaffold_642

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_642_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

228..1529
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E01591
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBL22861.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_019_000G1_scaffold_642_2
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1621..2499
DNA (879bp) protein (293aa)
ABC-type sugar transport systems, permease components n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LQ04_9FIRM
ABC-type sugar transport systems, permease components
ABC-type sugar transport systems, permease components {ECO:0000313|EMBL:CBL22862.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_019_000G1_scaffold_642_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2496..3317
DNA (822bp) protein (274aa)
multiple sugar-binding transporter permease MsmG n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D8028C
Uncharacterized protein {ECO:0000313|EMBL:EHI60949.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
sugar ABC transporter permease
L2_019_000G1_scaffold_642_4
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3329..4399
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030A7A1D
Predicted dehydrogenases and related proteins
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CBL22863.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_019_000G1_scaffold_642_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4421..6232
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003767084
Uncharacterized protein {ECO:0000313|EMBL:EHI60951.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
histidine kinase internal subunit
L2_019_000G1_scaffold_642_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6201..7706
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D63CD9
Uncharacterized protein {ECO:0000313|EMBL:EHI60952.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
two component transcriptional regulator, AraC family
L2_019_000G1_scaffold_642_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7767..8267)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77290.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_019_000G1_scaffold_642_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8394..9014)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77291.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_019_000G1_scaffold_642_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9091..10023)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77292.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative transmembrane K+ dependent Na+/Ca+ exchanger-related protein
L2_019_000G1_scaffold_642_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10476..10841)
DNA (366bp) protein (122aa)
Putative fluoride ion transporter CrcB n=2 Tax=Ruminococcus RepID=C6JC00_9FIRM
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
CrcB protein
L2_019_000G1_scaffold_642_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10912..11373)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77295.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
mutator MutT (7,8-dihydro-8-oxoguanine-triphosphatase)
L2_019_000G1_scaffold_642_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11458..12123)
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JC02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77296.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted membrane protein
L2_019_000G1_scaffold_642_13
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12596..13867)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A3L2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ20665.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L2_019_000G1_scaffold_642_14
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13833..14588)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A8K3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ20664.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
ABC transporter
L2_019_000G1_scaffold_642_15
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14702..15313)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A2F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ20663.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Predicted transcriptional regulators
L2_019_000G1_scaffold_642_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15488..15586
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LLT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM99413.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_019_000G1_scaffold_642_17
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15713..16654)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000306C832
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG91266.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Predicted transcriptional regulators
L2_019_000G1_scaffold_642_18
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16805..17119)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031DD469
Uncharacterized protein {ECO:0000313|EMBL:EEG91436.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L2_019_000G1_scaffold_642_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17157..17348)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77299.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_019_000G1_scaffold_642_20
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17660..17899
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87354.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L2_019_000G1_scaffold_642_21
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18530..19108)
DNA (579bp) protein (193aa)
Hypothetical integral membrane protein (Trep_Strep) n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N482_SLAHD
hypothetical protein
Hypothetical integral membrane protein (Trep_Strep) {ECO:0000313|EMBL:ACV23818.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L2_019_000G1_scaffold_642_22
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19142..20875)
DNA (1734bp) protein (578aa)
ABC transporter, ATP-binding protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2UZG3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERL05811.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
multidrug ABC transporter
L2_019_000G1_scaffold_642_23
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20883..22628)
DNA (1746bp) protein (582aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CFA1_9FIRM
Multidrug ABC transporter {ECO:0000313|EMBL:KGF09898.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
multidrug ABC transporter
L2_019_000G1_scaffold_642_24
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22932..23906
DNA (975bp) protein (325aa)
Transcriptional regulator, AraC family n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2THY8_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERL05808.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
AraC-type DNA-binding domain-containing proteins
L2_019_000G1_scaffold_642_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24418..25122)
DNA (705bp) protein (235aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=T2XU69_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ENZ04505.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_019_000G1_scaffold_642_26
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25106..26827)
DNA (1722bp) protein (574aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XH24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19314.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
plasmid mobilization system relaxase
L2_019_000G1_scaffold_642_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27023..27337)
DNA (315bp) protein (105aa)
Uncharacterized protein n=14 Tax=Clostridiales RepID=U4C9K2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGN33885.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
relaxasome subunit MobC
L2_019_000G1_scaffold_642_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27484..27714)
DNA (231bp) protein (77aa)
DNA binding domain, excisionase family n=10 Tax=Clostridiales RepID=D4LVL8_9FIRM
DNA binding domain, excisionase family
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:ENZ09263.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_019_000G1_scaffold_642_29
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27890..28519
DNA (630bp) protein (210aa)
Xre family Toxin-antitoxin system n=3 Tax=unclassified Lachnospiraceae RepID=E5XH27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33887.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Helix-turn-helix.
L2_019_000G1_scaffold_642_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28680..29975
DNA (1296bp) protein (432aa)
Integrase n=11 Tax=Clostridiales RepID=N9X1S4_9CLOT
Integrase {ECO:0000313|EMBL:ENZ09261.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Site-specific recombinase XerD
Displaying items 1-30 of 35 in total

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