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L2_019_000G1_scaffold_2774

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_2774_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..540)
DNA (540bp) protein (180aa)
L-2-hydroxyglutarate oxidase LhgO {ECO:0000256|HAMAP-Rule:MF_00990}; EC=1.1.3.15 {ECO:0000256|HAMAP-Rule:MF_00990};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L-2-hydroxyglutarate oxidase LhgO n=1 Tax=Escherichia coli KTE240 RepID=S1QZG6_ECOLX
FAD dependent oxidoreductase
L2_019_000G1_scaffold_2774_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(616..1485)
DNA (870bp) protein (290aa)
Protein CsiD n=2 Tax=Escherichia coli RepID=T7TVP7_ECOLX
Protein CsiD {ECO:0000256|HAMAP-Rule:MF_01083}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
csiD; hypothetical protein
L2_019_000G1_scaffold_2774_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2579..3061)
DNA (483bp) protein (161aa)
SsrA-binding protein n=1351 Tax=Enterobacteriaceae RepID=SSRP_ECO24
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; Small protein B {ECO:0000256|HAMAP-Rule:MF_00023}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_019_000G1_scaffold_2774_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3193..3669
DNA (477bp) protein (159aa)
Persistence and stress-resistance toxin PasT n=390 Tax=Escherichia RepID=PAST_ECOL6
yfjG; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE08409.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_019_000G1_scaffold_2774_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3659..3949
DNA (291bp) protein (97aa)
Persistence and stress-resistance antitoxin PasI n=380 Tax=Escherichia RepID=PASI_ECOL6
hypothetical protein
UPF0125 protein G925_02677 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_019_000G1_scaffold_2774_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4011..4352)
DNA (342bp) protein (114aa)
Outer membrane protein assembly factor BamE n=1339 Tax=Enterobacteriaceae RepID=BAME_ECOL6
OmlA family protein
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
L2_019_000G1_scaffold_2774_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4501..6162)
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=235 Tax=Escherichia RepID=A1AEE6_ECOK1
recN; recombination and repair protein
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_019_000G1_scaffold_2774_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6248..7126)
DNA (879bp) protein (293aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000255|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
Probable inorganic polyphosphate/ATP-NAD kinase n=370 Tax=Escherichia RepID=PPNK_ECO27
L2_019_000G1_scaffold_2774_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7249..7842
DNA (594bp) protein (198aa)
Protein GrpE n=14 Tax=Escherichia coli RepID=T6DIZ6_ECOLX
grpE; heat shock protein HSP70 cofactor
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
L2_019_000G1_scaffold_2774_10
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7897..8865)
DNA (969bp) protein (323aa)
CBS domain pair family protein n=1 Tax=Shigella dysenteriae 155-74 RepID=F3V8T5_SHIDY
Uncharacterized protein {ECO:0000313|EMBL:EIQ26823.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
yfjD; CBS/transporter associated domain protein
L2_019_000G1_scaffold_2774_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8931..9797)
DNA (867bp) protein (289aa)
Inner membrane protein ypjD n=1 Tax=Escherichia coli KTE101 RepID=L4FV51_ECOLX
ypjD; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD57717.1}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:H7 (strain CB9615 / EPEC).;"
L2_019_000G1_scaffold_2774_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9889..11250
DNA (1362bp) protein (454aa)
Signal recognition particle protein n=1280 Tax=Enterobacteriaceae RepID=SRP54_ECO57
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306, ECO:0000313|EMBL:CBJ02321.1}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O78:H11 (strain H10407 / ETEC).;"
L2_019_000G1_scaffold_2774_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11387..11635
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=Escherichia coli MS 185-1 RepID=D8CJ66_ECOLX
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
L2_019_000G1_scaffold_2774_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11654..12202
DNA (549bp) protein (183aa)
Ribosome maturation factor RimM n=1393 Tax=Enterobacteriaceae RepID=RIMM_SHIBS
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:H7 (strain CB9615 / EPEC).;"
L2_019_000G1_scaffold_2774_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12233..12868
DNA (636bp) protein (212aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Escherichia coli RepID=N2TGY6_ECOLX
trmD; tRNA (guanine-N1)-methyltransferase TrmD
L2_019_000G1_scaffold_2774_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12910..13257
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1440 Tax=Enterobacteriaceae RepID=RL19_ECO24
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L2_019_000G1_scaffold_2774_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13334..13816)
DNA (483bp) protein (161aa)
Lipoprotein yfiB n=315 Tax=Escherichia RepID=E2QQ62_ECOLX
outer membrane lipoprotein
Outer membrane lipoprotein {ECO:0000313|EMBL:ELJ69658.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_019_000G1_scaffold_2774_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13832..15058)
DNA (1227bp) protein (409aa)
Inner membrane protein yfiN n=116 Tax=Escherichia coli RepID=E2QQ61_ECOLX
yfiN; Inner membrane protein yfiN
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ELJ69657.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_019_000G1_scaffold_2774_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15048..15566)
DNA (519bp) protein (173aa)
Uncharacterized protein n=27 Tax=Escherichia coli RepID=K0U192_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQP48241.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L2_019_000G1_scaffold_2774_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15713..16078)
DNA (366bp) protein (122aa)
Lipoprotein n=27 Tax=Escherichia coli RepID=K0TWS9_ECOLX
hypothetical protein
Lipoprotein {ECO:0000313|EMBL:EQP48240.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_2774_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16289..17359
DNA (1071bp) protein (357aa)
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=417 Tax=Enterobacteriaceae RepID=E2QQ58_ECOLX
L2_019_000G1_scaffold_2774_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17370..18491
DNA (1122bp) protein (374aa)
tyrA; chorismate mutase / prephenate dehydrogenase (EC:1.3.1.12 5.4.99.5)
T-protein n=455 Tax=Enterobacteriaceae RepID=J7R7P6_ECOLX
T-protein {ECO:0000256|PIRNR:PIRNR001499}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L2_019_000G1_scaffold_2774_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18534..19694)
DNA (1161bp) protein (387aa)
pheA; bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
Bifunctional chorismate mutase/prephenate dehydratase n=28 Tax=Escherichia coli RepID=K0U5Y1_ECOLX
P-protein {ECO:0000313|EMBL:EQP48237.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_2774_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19944..20285)
DNA (342bp) protein (114aa)
Ribosome-associated inhibitor A n=1346 Tax=Enterobacteriaceae RepID=RAIA_ECO57
raiA; translation inhibitor protein RaiA
Stationary phase translation inhibitor and ribosome stability factor {ECO:0000313|EMBL:EHU08020.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L2_019_000G1_scaffold_2774_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20416..21153)
DNA (738bp) protein (246aa)
Outer membrane protein assembly factor BamD n=6 Tax=Escherichia coli RepID=T6H2I5_ECOLX
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
yfiO; outer membrane assembly lipoprotein YfiO
L2_019_000G1_scaffold_2774_26
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21288..22268
DNA (981bp) protein (327aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
Ribosomal large subunit pseudouridine synthase D n=389 Tax=Enterobacteriaceae RepID=RLUD_ECOL6
rluD; 23S rRNA pseudouridine synthase D
L2_019_000G1_scaffold_2774_27
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22265..22483
DNA (219bp) protein (73aa)
Putative uncharacterized protein yfiH n=1 Tax=Escherichia fergusonii ECD227 RepID=F0JT16_ESCFE
yfiH; hypothetical protein
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; Flags: Fragment;; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Displaying 27 items

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