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L2_019_000G1_scaffold_1113

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_1113_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..382
DNA (381bp) protein (127aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000255|HAMAP-Rule:MF_00378}; EC=3.1.11.6 {ECO:0000255|HAMAP-Rule:MF_00378};; Exodeoxyribonuclease VII large subunit {ECO:0000255|HAMAP-Rule:MF_00378}; Short=Exonuclease VII large subunit {ECO:0000255|HAMAP-Rule:MF_00378};; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
exodeoxyribonuclease VII large subunit n=1 Tax=Escherichia coli RepID=UPI00036F2B9A
L2_019_000G1_scaffold_1113_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(451..8244)
DNA (7794bp) protein (2598aa)
RatA-like protein n=2 Tax=Escherichia coli RepID=T7HWD6_ECOLX
RatA-like protein {ECO:0000313|EMBL:EQP49862.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
outer membrane protein
L2_019_000G1_scaffold_1113_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8335..8502)
DNA (168bp) protein (56aa)
RatA-like protein n=1 Tax=Escherichia coli HVH 70 (4-2963531) RepID=T6H8H2_ECOLX
hypothetical protein
RatA-like protein {ECO:0000313|EMBL:KJH07186.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_000G1_scaffold_1113_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8623..9189)
DNA (567bp) protein (189aa)
Aec3 n=21 Tax=Escherichia coli RepID=Q7X2C0_ECOLX
Aec3 {ECO:0000313|EMBL:AAP73744.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
SinI-like protein
L2_019_000G1_scaffold_1113_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9137..9601)
DNA (465bp) protein (155aa)
Uncharacterized protein n=13 Tax=Escherichia coli RepID=E6AIR9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQP49864.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
SinI-like protein
L2_019_000G1_scaffold_1113_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9656..10306)
DNA (651bp) protein (217aa)
Adhesin/invasin n=5 Tax=Escherichia coli RepID=T6HLW7_ECOLX
intimin/invasin
Adhesin/invasin {ECO:0000313|EMBL:EQP49865.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_1113_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10272..11567)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 151 (4-5755573) RepID=T7GYC7_ECOLX
intimin/invasin
Uncharacterized protein {ECO:0000313|EMBL:BAI55893.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_019_000G1_scaffold_1113_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11776..11991)
DNA (216bp) protein (72aa)
Uncharacterized protein n=34 Tax=Escherichia coli RepID=E6AIR7_ECOLX
yfgJ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP49866.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_1113_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12054..13526)
DNA (1473bp) protein (491aa)
GTPase Der n=34 Tax=Escherichia coli RepID=L3B5X8_ECOLX
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
der; GTPase, multicopy suppressor of ftsJ
L2_019_000G1_scaffold_1113_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13644..14822)
DNA (1179bp) protein (393aa)
Outer membrane protein assembly factor BamB n=133 Tax=Escherichia RepID=B7UGV8_ECO27
putative dehydrogenase
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L2_019_000G1_scaffold_1113_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14833..15453)
DNA (621bp) protein (207aa)
UPF0070 protein YfgM n=799 Tax=Enterobacteriaceae RepID=YFGM_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQY18343.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L2_019_000G1_scaffold_1113_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15471..16745)
DNA (1275bp) protein (425aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
Histidine--tRNA ligase n=79 Tax=Escherichia RepID=SYH_ECO27
hisS; histidyl-tRNA synthetase
L2_019_000G1_scaffold_1113_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16856..17974)
DNA (1119bp) protein (373aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=6 Tax=Escherichia coli RepID=T6HIR9_ECOLX
L2_019_000G1_scaffold_1113_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18001..19008)
DNA (1008bp) protein (336aa)
Cytoskeleton protein RodZ n=6 Tax=Escherichia coli RepID=T6H8I2_ECOLX
Cytoskeleton protein RodZ {ECO:0000256|HAMAP-Rule:MF_02017, ECO:0000256|SAAS:SAAS00008062}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
yfgA; cytoskeletal protein RodZ
L2_019_000G1_scaffold_1113_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19293..20447)
DNA (1155bp) protein (385aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Dual-specificity RNA methyltransferase RlmN n=919 Tax=Enterobacteriaceae RepID=RLMN_ECO24
rlmN; ribosomal RNA large subunit methyltransferase N
L2_019_000G1_scaffold_1113_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20597..21028)
DNA (432bp) protein (144aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
Nucleoside diphosphate kinase n=405 Tax=Escherichia RepID=NDK_ECO45
L2_019_000G1_scaffold_1113_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21177..23453)
DNA (2277bp) protein (759aa)
pbpC; penicillin-binding protein 1C (EC:2.4.2.-)
Penicillin-binding protein 1C n=26 Tax=Escherichia coli RepID=L5VMM0_ECOLX
Penicillin-binding protein 1C {ECO:0000313|EMBL:EQP49875.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_1113_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23490..28451)
DNA (4962bp) protein (1654aa)
Alpha-2-macroglobulin n=5 Tax=Escherichia coli RepID=T7HWC3_ECOLX
Alpha-2-macroglobulin {ECO:0000313|EMBL:EQP49876.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
yfhM; lipoprotein yfhM
L2_019_000G1_scaffold_1113_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28658..29503
DNA (846bp) protein (282aa)
3-mercaptopyruvate sulfurtransferase n=6 Tax=Escherichia coli RepID=T6H8I7_ECOLX
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
sseA; 3-mercaptopyruvate sulfurtransferase
L2_019_000G1_scaffold_1113_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29996..30772)
DNA (777bp) protein (259aa)
Protein sseB n=88 Tax=Escherichia coli RepID=E2QPY8_ECOLX
enhanced serine sensitivity protein SseB
Protein sseB {ECO:0000313|EMBL:ELJ69920.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_019_000G1_scaffold_1113_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30979..31935)
DNA (957bp) protein (319aa)
Peptidase B {ECO:0000256|HAMAP-Rule:MF_00504}; EC=3.4.11.23 {ECO:0000256|HAMAP-Rule:MF_00504};; Aminopeptidase B {ECO:0000256|HAMAP-Rule:MF_00504}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
pepB; aminopeptidase B (EC:3.4.11.23)
Peptidase B n=6 Tax=Escherichia coli RepID=T6H751_ECOLX
L2_019_000G1_scaffold_1113_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31994..32194)
DNA (201bp) protein (67aa)
Protein IscX n=277 Tax=Escherichia RepID=ISCX_ECOL6
yfhJ; hypothetical protein
FeS assembly protein IscX {ECO:0000313|EMBL:EGI15221.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L2_019_000G1_scaffold_1113_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32206..32541)
DNA (336bp) protein (112aa)
2Fe-2S ferredoxin n=405 Tax=Escherichia RepID=E2QPZ1_ECOLX
fdx; [2Fe-2S] ferredoxin
Ferredoxin {ECO:0000313|EMBL:EGB72378.1}; TaxID=656449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TW10509.;"
L2_019_000G1_scaffold_1113_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32543..34114)
DNA (1572bp) protein (524aa)
Chaperone protein HscA n=1 Tax=Escherichia coli O7:K1 (strain IAI39 / ExPEC) RepID=HSCA_ECO7I
hscA; chaperone protein HscA
Chaperone protein HscA {ECO:0000256|HAMAP-Rule:MF_00679}; Hsc66 {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_019_000G1_scaffold_1113_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(34131..34646)
DNA (516bp) protein (172aa)
Co-chaperone protein HscB n=911 Tax=Enterobacteriaceae RepID=HSCB_ECO7I
co-chaperone Hsc20
Co-chaperone protein HscB {ECO:0000256|HAMAP-Rule:MF_00682}; Hsc20 {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
L2_019_000G1_scaffold_1113_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34742..35065)
DNA (324bp) protein (108aa)
Iron-binding protein IscA n=1441 Tax=Enterobacteriaceae RepID=ISCA_ECO27
iscA; FeS cluster assembly protein
Iron-binding protein IscA {ECO:0000256|HAMAP-Rule:MF_01429, ECO:0000256|SAAS:SAAS00037071}; Iron-sulfur cluster assembly protein {ECO:0000256|HAMAP-Rule:MF_01429}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_019_000G1_scaffold_1113_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(35082..35468)
DNA (387bp) protein (129aa)
NifU-like protein n=1380 Tax=Enterobacteriaceae RepID=NIFU_ECO57
scaffold protein
NifU-like protein {ECO:0000313|EMBL:EMX31345.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
L2_019_000G1_scaffold_1113_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35496..36710)
DNA (1215bp) protein (405aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
Cysteine desulfurase n=1398 Tax=Bacteria RepID=ISCS_ECO24
Displaying 28 items

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