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L2_019_000G1_scaffold_1542

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_1542_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..510
DNA (510bp) protein (170aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Escherichia coli O18:K1:H7 (strain IHE3034 / ExPEC) RepID=D5CVV2_ECOKI
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
L2_019_000G1_scaffold_1542_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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565..1692
DNA (1128bp) protein (376aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
Queuine tRNA-ribosyltransferase n=1342 Tax=Enterobacteriaceae RepID=TGT_ECO24
L2_019_000G1_scaffold_1542_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1715..2047
DNA (333bp) protein (111aa)
UPF0092 membrane protein YajC n=1434 Tax=Enterobacteriaceae RepID=YAJC_ECO57
yajC; preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EZK26215.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L2_019_000G1_scaffold_1542_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2108..3922
DNA (1815bp) protein (605aa)
Protein translocase subunit SecD n=359 Tax=Escherichia RepID=E2QGF2_ECOLX
secD; hypothetical protein
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_019_000G1_scaffold_1542_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3933..4904
DNA (972bp) protein (324aa)
Protein translocase subunit SecF n=1280 Tax=Enterobacteriaceae RepID=SECF_ECO57
secF; preprotein translocase subunit SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
L2_019_000G1_scaffold_1542_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5034..5381
DNA (348bp) protein (116aa)
Uncharacterized protein YajD n=1304 Tax=Enterobacteriaceae RepID=YAJD_ECO57
hypothetical protein
HNH endonuclease family protein {ECO:0000313|EMBL:KDY62336.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L2_019_000G1_scaffold_1542_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5419..6303)
DNA (885bp) protein (295aa)
Nucleoside-specific channel-forming protein tsx n=340 Tax=Escherichia RepID=E2QGF5_ECOLX
tsx; nucleoside-specific channel-forming protein Tsx
Nucleoside-specific channel-forming protein tsx {ECO:0000313|EMBL:ELJ76144.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_019_000G1_scaffold_1542_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6602..7141)
DNA (540bp) protein (180aa)
Uncharacterized protein n=300 Tax=Escherichia RepID=E1S1J5_ECOUM
yajI; hypothetical protein
Lipoprotein {ECO:0000313|EMBL:EQX32811.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_019_000G1_scaffold_1542_9
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7292..7741
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=957 Tax=Enterobacteriaceae RepID=NRDR_ECO24
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1401327 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae WRSd3.;"
L2_019_000G1_scaffold_1542_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7745..8848
DNA (1104bp) protein (368aa)
ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:3.5.4.26)
Riboflavin biosynthesis protein RibD n=265 Tax=Escherichia coli RepID=E2QGF8_ECOLX
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L2_019_000G1_scaffold_1542_11
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8937..9407
DNA (471bp) protein (157aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=766155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1485-80.;"
6,7-dimethyl-8-ribityllumazine synthase n=1503 Tax=Bacteria RepID=RISB_CITK8
ribH; 6,7-dimethyl-8-ribityllumazine synthase
L2_019_000G1_scaffold_1542_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9427..9846
DNA (420bp) protein (140aa)
N utilization substance protein B homolog n=1421 Tax=Enterobacteriaceae RepID=NUSB_ECO24
nusB; transcription antitermination protein
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_019_000G1_scaffold_1542_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9924..10901
DNA (978bp) protein (326aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
Thiamine-monophosphate kinase n=476 Tax=Enterobacteriaceae RepID=THIL_ECOL6
L2_019_000G1_scaffold_1542_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10879..11397
DNA (519bp) protein (173aa)
pgpA; phosphatidylglycerophosphatase A (EC:3.1.3.27)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Phosphatidylglycerophosphatase A n=314 Tax=Escherichia RepID=E2QGG2_ECOLX
L2_019_000G1_scaffold_1542_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11451..12425)
DNA (975bp) protein (325aa)
2-carboxybenzaldehyde reductase n=6 Tax=Escherichia coli RepID=T6HYL8_ECOLX
2-carboxybenzaldehyde reductase {ECO:0000313|EMBL:EQP59294.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
aldo/keto reductase family oxidoreductase
L2_019_000G1_scaffold_1542_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12480..14342)
DNA (1863bp) protein (621aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=30 Tax=Escherichia coli RepID=L3BF61_ECOLX
L2_019_000G1_scaffold_1542_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14367..15023)
DNA (657bp) protein (219aa)
ispA; geranyltranstransferase (EC:2.5.1.10)
Farnesyl diphosphate synthase n=1 Tax=Escherichia coli HVH 21 (4-4517873) RepID=T5TX09_ECOLX
Polyprenyl synthetase {ECO:0000313|EMBL:ESD33528.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
Displaying 17 items

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