ggKbase home page

L2_019_000G1_scaffold_1820

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_1820_1
unknown

Not on your lists

1..66
DNA (66bp) protein (22aa)

This feature has no annotations

L2_019_000G1_scaffold_1820_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116..829)
DNA (714bp) protein (238aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Glucosamine-6-phosphate deaminase n=16 Tax=Escherichia coli RepID=L2WH11_ECOLX
agaI; galactosamine-6-phosphate isomerase
L2_019_000G1_scaffold_1820_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(884..1675)
DNA (792bp) protein (264aa)
Galactosamine-specific PTS system enzyme IID component n=1112 Tax=Enterobacteriaceae RepID=C3ST22_ECOLX
agaD2; PTS system N-acetylgalactosamine-specific transporter subunit IID
N-acetylgalactosamine permease IID component {ECO:0000313|EMBL:EFZ59232.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L2_019_000G1_scaffold_1820_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1665..2468)
DNA (804bp) protein (268aa)
N-acetylgalactosamine permease IIC component 1 n=257 Tax=Escherichia coli RepID=E2QEH9_ECOLX
agaC; PTS system, N-acetylgalactosamine-specific IIC component 1
N-acetylgalactosamine permease IIC component 1 {ECO:0000313|EMBL:ELE57771.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
L2_019_000G1_scaffold_1820_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2507..2983)
DNA (477bp) protein (159aa)
agaB; PTS system N-acetylgalactosamine-specific transporter subunit IIB (EC:2.7.1.69)
Galactosamine-specific PTS system enzyme IIB component n=699 Tax=Escherichia RepID=C3ST27_ECOLX
Galactosamine-specific PTS system enzyme IIB component {ECO:0000313|EMBL:KDW73309.1}; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
L2_019_000G1_scaffold_1820_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3150..4010)
DNA (861bp) protein (287aa)
kbaY; tagatose-bisphosphate aldolase (EC:4.1.2.40)
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_01293};; D-tagatose-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Ketose 1,6-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_01293}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=1141 Tax=Enterobacteriaceae RepID=KBAY_ECO24
L2_019_000G1_scaffold_1820_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4023..5177)
DNA (1155bp) protein (385aa)
tagatose-6-phosphate ketose/aldose isomerase (EC:5.-.-.-)
Sugar isomerase, AgaS family n=38 Tax=Escherichia coli RepID=D8BDU4_ECOLX
Tagatose-6-phosphate ketose/aldose isomerase {ECO:0000313|EMBL:EQP45911.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_1820_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5527..6387)
DNA (861bp) protein (287aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Escherichia coli KOEGE 61 (174a) RepID=T8H6Y3_ECOLX
N-acetylglucosamine-6-phosphate deacetylase
L2_019_000G1_scaffold_1820_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6384..6818)
DNA (435bp) protein (145aa)
Phosphotransferase system enzyme subunit IIA component n=941 Tax=Enterobacteriaceae RepID=E2QEH4_ECOLX
agaF; PTS system mannose/sorbose-specific transporter subunit IIA
PTS system fructose IIA component {ECO:0000313|EMBL:EFJ85989.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L2_019_000G1_scaffold_1820_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6836..7714)
DNA (879bp) protein (293aa)
PTS system, N-acetylgalactosamine-specific IID component n=276 Tax=Escherichia RepID=E2QEH3_ECOLX
PTS system N-acetylgalactosamine-specific transporter subunit IID
PTS system N-acetylgalactosamine-specific IID component {ECO:0000313|EMBL:EQN91295.1}; TaxID=1280976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 25 (4-5851939).;"
L2_019_000G1_scaffold_1820_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7704..8483)
DNA (780bp) protein (260aa)
N-acetylgalactosamine permease IIC component 2 n=1162 Tax=Enterobacteriaceae RepID=C3ST47_ECOLX
agaW; PTS system N-acetylgalactosamine-specific transporter subunit IIC
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:KDX47003.1}; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C2.;"
L2_019_000G1_scaffold_1820_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8494..8967)
DNA (474bp) protein (158aa)
agaV; PTS system N-acetylgalactosamine-specific transporter subunit IIB (EC:2.7.1.69)
N-acetylgalactosamine-specific phosphotransferase n=209 Tax=Escherichia RepID=E2QEH1_ECOLX
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:ELJ68156.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_019_000G1_scaffold_1820_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8990..10270)
DNA (1281bp) protein (427aa)
tagatose 6-phosphate kinase agaZ (EC:2.7.1.144)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=61 Tax=Escherichia coli RepID=KBAZ_ECOL5
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000256|HAMAP-Rule:MF_01295}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_1820_14
unknown

Not on your lists

comp(10759..11115)
DNA (357bp) protein (119aa)

This feature has no annotations

L2_019_000G1_scaffold_1820_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11229..12704)
DNA (1476bp) protein (492aa)
D-galactarate dehydratase {ECO:0000313|EMBL:KGM62165.1}; EC=4.2.1.42 {ECO:0000313|EMBL:KGM62165.1};; TaxID=1455601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli G3/10.;"
(D)-galactarate dehydrogenase n=117 Tax=Escherichia coli RepID=E1PEX8_ECOAB
yhaG; D-galactarate dehydratase
L2_019_000G1_scaffold_1820_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13079..14413
DNA (1335bp) protein (445aa)
Galactarate transporter n=314 Tax=Escherichia coli RepID=E2QEG5_ECOLX
garP; (D)-galactarate transporter
Putative (D)-galactarate transporter {ECO:0000313|EMBL:EMD07825.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
L2_019_000G1_scaffold_1820_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14429..15199
DNA (771bp) protein (257aa)
garL; alpha-dehydro-beta-deoxy-D-glucarate aldolase (EC:4.1.2.20)
5-keto-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Short=KDGluc aldolase {ECO:0000256|HAMAP-Rule:MF_01291};; Short=KDGlucA {ECO:0000256|HAMAP-Rule:MF_01291};; EC=4.1.2.20 {ECO:0000256|HAMAP-Rule:MF_01291};; 2-dehydro-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 2-keto-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 5-dehydro-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Alpha-keto-beta-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
5-keto-4-deoxy-D-glucarate aldolase n=804 Tax=Enterobacteriaceae RepID=GARL_ECO24
L2_019_000G1_scaffold_1820_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15229..16119
DNA (891bp) protein (297aa)
yhaE; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
Tartronate semialdehyde reductase {ECO:0000313|EMBL:AJO86690.1}; EC=1.1.1.60 {ECO:0000313|EMBL:AJO86690.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
2-hydroxy-3-oxopropionate reductase n=2 Tax=Escherichia coli RepID=T7RFX1_ECOLX
L2_019_000G1_scaffold_1820_19
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16216..17361
DNA (1146bp) protein (382aa)
Glycerate kinase 2 n=261 Tax=Escherichia RepID=E2QEG2_ECOLX
hypothetical protein
Glycerate kinase I {ECO:0000313|EMBL:CDC81779.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_019_000G1_scaffold_1820_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18336..18680)
DNA (345bp) protein (115aa)
Threonine dehydratase operon n=5 Tax=Escherichia coli RepID=E2QEG1_ECOLX
DNA-binding transcriptional activator TdcR
DNA-binding transcriptional activator {ECO:0000313|EMBL:EQP45898.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_1820_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18869..19807
DNA (939bp) protein (313aa)
HTH-type transcriptional regulator tdcA n=344 Tax=Escherichia RepID=E2QEG0_ECOLX
tdcA; DNA-binding transcriptional activator TdcA
HTH-type transcriptional regulator tdcA {ECO:0000313|EMBL:ELE53089.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L2_019_000G1_scaffold_1820_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19906..20895
DNA (990bp) protein (330aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EFK20446.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EFK20446.1};; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L-threonine dehydratase catabolic TdcB n=1302 Tax=Enterobacteriaceae RepID=TDCB_ECO57
threonine deaminase
L2_019_000G1_scaffold_1820_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20917..22248
DNA (1332bp) protein (444aa)
Threonine/serine transporter TdcC n=1 Tax=Escherichia coli H252 RepID=E9VAG3_ECOLX
tdcC; threonine/serine transporter TdcC
Threonine/serine transporter TdcC {ECO:0000256|HAMAP-Rule:MF_01583}; H(+)/threonine-serine symporter {ECO:0000256|HAMAP-Rule:MF_01583}; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O69:H11 str. 08-4661.;"
L2_019_000G1_scaffold_1820_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22274..23482
DNA (1209bp) protein (403aa)
propionate/acetate kinase (EC:2.7.2.15)
Propionate kinase {ECO:0000256|HAMAP-Rule:MF_01881, ECO:0000313|EMBL:CDN83865.1}; EC=2.7.2.15 {ECO:0000256|HAMAP-Rule:MF_01881};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Propionate kinase n=64 Tax=Escherichia RepID=D2NMX1_ECOS5
L2_019_000G1_scaffold_1820_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23516..24100
DNA (585bp) protein (195aa)
Keto-acid formate acetyltransferase n=2 Tax=Escherichia coli RepID=R9ECT0_ECOLX
tdcE; keto-acid formate acetyltransferase
Keto-acid formate acetyltransferase {ECO:0000313|EMBL:ELJ68142.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_019_000G1_scaffold_1820_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24039..25517
DNA (1479bp) protein (493aa)
Keto-acid formate acetyltransferase n=1 Tax=Escherichia coli KOEGE 10 (25a) RepID=U0B0X6_ECOLX
putative formate acetyltransferase 3
Putative formate acetyltransferase 3 {ECO:0000313|EMBL:BAI56494.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_019_000G1_scaffold_1820_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25531..25920
DNA (390bp) protein (130aa)
TdcF protein n=4 Tax=Escherichia coli RepID=D3QS56_ECOCB
hypothetical protein
Protein tdcF {ECO:0000313|EMBL:END88951.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L2_019_000G1_scaffold_1820_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25992..27356
DNA (1365bp) protein (455aa)
L-serine dehydratase tdcG n=8 Tax=Escherichia coli RepID=L3JQ50_ECOLX
L-serine dehydratase tdcG {ECO:0000313|EMBL:EQP45891.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L-serine dehydratase 1
L2_019_000G1_scaffold_1820_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27380..28711
DNA (1332bp) protein (444aa)
Serine transporter family protein n=359 Tax=Escherichia RepID=D5D1C8_ECOKI
putative amino acid permease
Inner membrane transporter YhaO {ECO:0000313|EMBL:EQP45890.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_1820_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28739..30049
DNA (1311bp) protein (437aa)
UPF0597 protein YhaM n=208 Tax=Escherichia RepID=YHAM_ECO45
yhaM; hypothetical protein
UPF0597 protein YhaM {ECO:0000255|HAMAP-Rule:MF_01845}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Displaying items 1-30 of 46 in total

View Taxonomy