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L2_019_000G1_scaffold_1877

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_1877_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..545
DNA (543bp) protein (181aa)
choline dehydrogenase (EC:1.1.99.1)
Oxygen-dependent choline dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00750}; Short=CDH {ECO:0000255|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000255|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000255|HAMAP-Rule:MF_00750};; Betaine aldehyde dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00750}; Short=BADH {ECO:0000255|HAMAP-Rule:MF_00750};; EC=1.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00750};; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
Oxygen-dependent choline dehydrogenase n=6 Tax=Escherichia coli RepID=T6HQ72_ECOLX
L2_019_000G1_scaffold_1877_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1276..1839
DNA (564bp) protein (188aa)
Type 1 fimbriae regulatory protein FimX n=355 Tax=Escherichia RepID=I2FKM0_ECOLX
site-specific recombinase, phage integrase family
Type 1 fimbriae Regulatory protein FimB {ECO:0000313|EMBL:EGI47308.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L2_019_000G1_scaffold_1877_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2169..2753
DNA (585bp) protein (195aa)
Bacterial regulatory proteins, luxR family n=2 Tax=Escherichia coli RepID=T2MMA1_ECOLX
hypothetical protein
HTH DNA-binding domain-containing protein {ECO:0000313|EMBL:CKH78673.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_000G1_scaffold_1877_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2750..2890
DNA (141bp) protein (47aa)
Uncharacterized protein n=206 Tax=Escherichia coli RepID=G7R583_ECOC2
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH78645.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_000G1_scaffold_1877_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2907..3668
DNA (762bp) protein (254aa)
Uncharacterized protein n=124 Tax=Escherichia coli RepID=E1P940_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP59193.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_1877_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3710..3844
DNA (135bp) protein (45aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Escherichia coli STEC_MHI813 RepID=G2C022_ECOLX
autotransporter
Putative autotransporter {ECO:0000313|EMBL:CDP68041.1}; TaxID=1400022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D6-113.11.;"
L2_019_000G1_scaffold_1877_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3955..4587
DNA (633bp) protein (211aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Escherichia coli H263 RepID=E9VIG3_ECOLX
autotransporter outer membrane protein
Adhesin%3B outer membrane autotransporter barrel {ECO:0000313|EMBL:CKH78586.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_000G1_scaffold_1877_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4644..5273
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 2 (4-6943160) RepID=T5MMB4_ECOLX
putative outer membrane autotransporter
Putative autotransporter {ECO:0000313|EMBL:ADD55044.1}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:H7 (strain CB9615 / EPEC).;"
L2_019_000G1_scaffold_1877_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5245..5727
DNA (483bp) protein (161aa)
Autotransporter n=1 Tax=Escherichia coli HVH 116 (4-6879942) RepID=T6V7V7_ECOLX
putative outer membrane autotransporter
Adhesin%3B outer membrane autotransporter barrel {ECO:0000313|EMBL:CKH78586.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_000G1_scaffold_1877_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5911..6579
DNA (669bp) protein (223aa)
Uncharacterized protein n=113 Tax=Escherichia RepID=B7MCC4_ECO45
hypothetical protein
Inner membrane protein {ECO:0000313|EMBL:EQP59191.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_1877_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6822..7517)
DNA (696bp) protein (232aa)
Uncharacterized protein n=265 Tax=Escherichia RepID=G7R4J9_ECOC2
ykgG; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ54339.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_019_000G1_scaffold_1877_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7510..8937)
DNA (1428bp) protein (476aa)
Iron-sulfur cluster binding protein n=92 Tax=Escherichia RepID=D5CVL8_ECOKI
putative oxidoreductase subunit with NAD(P)-binding domain and ferredoxin-like domain
Putative electron transport protein YkgF {ECO:0000313|EMBL:CKH78495.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_000G1_scaffold_1877_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8948..9667)
DNA (720bp) protein (240aa)
Uncharacterized protein ykgE n=422 Tax=Escherichia RepID=E2QG70_ECOLX
ykgE; hypothetical protein
Oxidoreductase {ECO:0000313|EMBL:EQP59188.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_1877_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10194..11048)
DNA (855bp) protein (285aa)
Predicted DNA-binding transcriptional regulator n=235 Tax=Escherichia RepID=B7UJF8_ECO27
ykgD; DNA-binding transcriptional regulator
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EHU50281.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L2_019_000G1_scaffold_1877_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11275..12600
DNA (1326bp) protein (442aa)
Pyridine nucleotide-disulfide oxidoreductase n=139 Tax=Escherichia RepID=E2QG68_ECOLX
pyridine nucleotide-disulfide oxidoreductase
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EOX01464.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_019_000G1_scaffold_1877_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12957..13550
DNA (594bp) protein (198aa)
Inner membrane protein ykgB n=6 Tax=Escherichia coli RepID=T6IDN3_ECOLX
Inner membrane protein ykgB {ECO:0000313|EMBL:EQP59185.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L2_019_000G1_scaffold_1877_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13710..14579)
DNA (870bp) protein (290aa)
Predicted reductase n=312 Tax=Escherichia RepID=B7UJF4_ECO27
putative dehydrogenase
Predicted reductase {ECO:0000313|EMBL:CAS07811.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
L2_019_000G1_scaffold_1877_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14827..15684
DNA (858bp) protein (286aa)
Uncharacterized HTH-type transcriptional regulator n=220 Tax=Escherichia RepID=E2QG64_ECOLX
transcriptional regulator
Transcriptional regulator, effector binding domain protein {ECO:0000313|EMBL:ESD40554.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_019_000G1_scaffold_1877_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15809..16738)
DNA (930bp) protein (310aa)
Adhesin/invasin n=1 Tax=Escherichia coli HVH 178 (4-3189163) RepID=V4D083_ECOLX
putative adhesin
Bacterial Ig-like domain family protein {ECO:0000313|EMBL:EHU62667.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L2_019_000G1_scaffold_1877_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16708..18117)
DNA (1410bp) protein (470aa)
Adhesin/invasin n=6 Tax=Escherichia coli RepID=T6HZZ6_ECOLX
Adhesin/invasin {ECO:0000313|EMBL:EQP59182.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
eaeH; adhesin
L2_019_000G1_scaffold_1877_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18114..19574)
DNA (1461bp) protein (487aa)
Attaching and effacing protein, pathogenesis factor n=4 Tax=Escherichia coli RepID=F4SUC1_ECOLX
adhesin
Attaching and effacing protein, pathogenesis factor {ECO:0000313|EMBL:ABE05822.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Displaying 21 items

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