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L2_019_000G1_scaffold_1995

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_1995_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1287)
DNA (1287bp) protein (429aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
Enolase n=1 Tax=Escherichia coli 4.0967 RepID=I2WWD7_ECOLX
eno; enolase
L2_019_000G1_scaffold_1995_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1375..3012)
DNA (1638bp) protein (546aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
CTP synthase n=1284 Tax=Enterobacteriaceae RepID=PYRG_ECO24
L2_019_000G1_scaffold_1995_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3240..4031)
DNA (792bp) protein (264aa)
Nucleoside triphosphate pyrophosphohydrolase {ECO:0000313|EMBL:EZJ49505.1}; EC=3.6.1.8 {ECO:0000313|EMBL:EZJ49505.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Nucleoside triphosphate pyrophosphohydrolase n=13 Tax=Escherichia coli RepID=B7MZ77_ECO81
mazG; nucleoside triphosphate pyrophosphohydrolase
L2_019_000G1_scaffold_1995_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4103..4438)
DNA (336bp) protein (112aa)
mRNA interferase MazF {ECO:0000313|EMBL:EZJ37077.1}; EC=3.1.-.- {ECO:0000313|EMBL:EZJ37077.1};; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
PemK-like protein 1 n=154 Tax=Escherichia RepID=E2QQM8_ECOLX
chpA; PemK-like protein 1
L2_019_000G1_scaffold_1995_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4438..4686)
DNA (249bp) protein (83aa)
Antitoxin MazE n=1060 Tax=Enterobacteriaceae RepID=MAZE_ECO57
antitoxin MazE
Antitoxin MazE {ECO:0000313|EMBL:KDX24735.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
L2_019_000G1_scaffold_1995_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4764..6998)
DNA (2235bp) protein (745aa)
relA; GDP/GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase n=71 Tax=Escherichia coli RepID=Q0TE75_ECOL5
GTP pyrophosphokinase {ECO:0000313|EMBL:ELJ69178.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_019_000G1_scaffold_1995_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7046..8347)
DNA (1302bp) protein (434aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000255|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000255|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01010}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=104 Tax=Escherichia RepID=RLMD_ECOK1
rumA; 23S rRNA 5-methyluridine methyltransferase
L2_019_000G1_scaffold_1995_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8404..11160
DNA (2757bp) protein (919aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
barA; hybrid sensory histidine kinase BarA (EC:2.7.13.3)
Signal transduction histidine-protein kinase barA n=120 Tax=Escherichia RepID=E2QQN2_ECOLX
L2_019_000G1_scaffold_1995_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11391..12542)
DNA (1152bp) protein (384aa)
Glucarate dehydratase n=1 Tax=Escherichia coli KTE75 RepID=L3Q0Y0_ECOLX
ygcY; glucarate dehydratase
Glucarate dehydratase {ECO:0000313|EMBL:EQX25611.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_019_000G1_scaffold_1995_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12544..13896)
DNA (1353bp) protein (451aa)
Glucarate transporter n=839 Tax=Enterobacteriaceae RepID=E2QQN5_ECOLX
D-glucarate transporter GudP
Putative glucarate transporter {ECO:0000313|EMBL:EKJ13518.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
L2_019_000G1_scaffold_1995_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14330..14779)
DNA (450bp) protein (150aa)
Flavodoxin n=324 Tax=Escherichia RepID=D5CZ67_ECOKI
flavodoxin
Putative flavodoxin {ECO:0000313|EMBL:CKH12545.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_000G1_scaffold_1995_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14797..15204)
DNA (408bp) protein (136aa)
Pseudouridine synthase n=194 Tax=Escherichia RepID=D2NLU8_ECOS5
yqcB; tRNA pseudouridine synthase C
tRNA pseudouridine synthase C {ECO:0000313|EMBL:AJO84768.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_000G1_scaffold_1995_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15221..15313)
DNA (93bp) protein (31aa)
Pseudouridine synthase n=5 Tax=Escherichia coli RepID=I2ZH05_ECOLX
truC; tRNA pseudouridine synthase C
RNA pseudouridylate synthase family protein {ECO:0000313|EMBL:END90421.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L2_019_000G1_scaffold_1995_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15313..15642)
DNA (330bp) protein (110aa)
Uncharacterized protein n=176 Tax=Escherichia coli RepID=B7MZ88_ECO81
ygcC; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU07338.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L2_019_000G1_scaffold_1995_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16264..16809)
DNA (546bp) protein (182aa)
Protein Syd n=912 Tax=Enterobacteriaceae RepID=SYDP_ECO24
Syd family protein
Protein Syd {ECO:0000256|HAMAP-Rule:MF_01104, ECO:0000256|SAAS:SAAS00064630}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_019_000G1_scaffold_1995_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16877..17725
DNA (849bp) protein (283aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=290 Tax=Enterobacteriaceae RepID=QUEF_ECO24
queF; 7-cyano-7-deazaguanine reductase
L2_019_000G1_scaffold_1995_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17837..19201
DNA (1365bp) protein (455aa)
LOG family protein YgdH n=1259 Tax=Enterobacteriaceae RepID=YGDH_ECO57
ygdH; rossmann fold nucleotide-binding protein
Putative nucleotide binding protein {ECO:0000313|EMBL:EGI44926.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L2_019_000G1_scaffold_1995_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19758..21047
DNA (1290bp) protein (430aa)
Serine transporter n=398 Tax=Escherichia RepID=E2QQP2_ECOLX
sdaC; serine transporter
Serine transporter {ECO:0000313|EMBL:EFR18370.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
L2_019_000G1_scaffold_1995_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21105..22352
DNA (1248bp) protein (416aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:EMW17676.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EMW17676.1};; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
L-serine dehydratase 2 n=573 Tax=Enterobacteriaceae RepID=E2QQP3_ECOLX
sdaB; L-serine deaminase II
L2_019_000G1_scaffold_1995_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22363..23118
DNA (756bp) protein (252aa)
Flap endonuclease Xni {ECO:0000255|HAMAP-Rule:MF_01192}; Short=FEN {ECO:0000255|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01192};; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
exo; Exonuclease IX (EC:2.7.7.7)
Flap endonuclease Xni n=4 Tax=Escherichia coli RepID=XNI_ECO81
L2_019_000G1_scaffold_1995_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23223..24371)
DNA (1149bp) protein (383aa)
Lactaldehyde reductase n=167 Tax=Escherichia coli RepID=E2QQP5_ECOLX
fucO; L-1,2-propanediol oxidoreductase
Lactaldehyde reductase {ECO:0000313|EMBL:EQP47602.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_000G1_scaffold_1995_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24399..25046)
DNA (648bp) protein (216aa)
L-fuculose phosphate aldolase (EC:4.1.2.17)
L-fuculose phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; EC=4.1.2.17 {ECO:0000256|HAMAP-Rule:MF_00987};; L-fuculose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L-fuculose phosphate aldolase n=391 Tax=Escherichia RepID=FUCA_ECOL6
L2_019_000G1_scaffold_1995_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25593..26789
DNA (1197bp) protein (399aa)
L-fucose-proton symporter n=2 Tax=Escherichia coli RepID=T6DAD8_ECOLX
fucP; L-fucose transporter
L-fucose:H+ symporter permease {ECO:0000313|EMBL:ACB19059.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
L2_019_000G1_scaffold_1995_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26858..28441
DNA (1584bp) protein (528aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
fucI; L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=7 Tax=Escherichia coli RepID=I4S1C9_ECOLX
L2_019_000G1_scaffold_1995_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28550..29968
DNA (1419bp) protein (473aa)
L-fuculokinase {ECO:0000256|HAMAP-Rule:MF_00986}; EC=2.7.1.51 {ECO:0000256|HAMAP-Rule:MF_00986};; L-fuculose kinase {ECO:0000256|HAMAP-Rule:MF_00986}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L-fuculokinase n=15 Tax=Escherichia coli RepID=E2QQP9_ECOLX
L-fuculokinase
L2_019_000G1_scaffold_1995_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29970..30392
DNA (423bp) protein (141aa)
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01662}; Type-2 mutarotase {ECO:0000256|HAMAP-Rule:MF_01662}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L-fucose mutarotase n=8 Tax=Escherichia coli RepID=E2QQQ0_ECOLX
L-fucose mutarotase
L2_019_000G1_scaffold_1995_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30450..31181
DNA (732bp) protein (244aa)
DNA-binding transcriptional activator FucR n=5 Tax=Escherichia RepID=G7R6N4_ECOC2
fucR; DNA-binding transcriptional activator FucR
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EHU23754.1}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
L2_019_000G1_scaffold_1995_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31225..32325)
DNA (1101bp) protein (367aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01551}; 23S rRNA 2'-O-ribose methyltransferase RlmM {ECO:0000256|HAMAP-Rule:MF_01551}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
Ribosomal RNA large subunit methyltransferase M n=198 Tax=Escherichia coli RepID=RLMM_ECO27
ygdE; putative RNA 2'-O-ribose methyltransferase
L2_019_000G1_scaffold_1995_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32318..32713)
DNA (396bp) protein (132aa)
UPF0382 inner membrane protein YgdD n=1299 Tax=Enterobacteriaceae RepID=YGDD_ECO57
ygdD; hypothetical protein
Conserved predicted inner membrane protein {ECO:0000313|EMBL:CAS10622.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
L2_019_000G1_scaffold_1995_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32732..33649)
DNA (918bp) protein (306aa)
Glycine cleavage system transcriptional activator n=1321 Tax=Enterobacteriaceae RepID=GCVA_ECO57
gcvA; positive regulator of gcv operon
LysR family transcriptional regulator {ECO:0000313|EMBL:EFE61653.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
Displaying items 1-30 of 37 in total

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