ggKbase home page

L2_019_000G1_scaffold_218_19

Organism: L2_019_000G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: 20920..22029

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2D3_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 370.0
  • Bit_score: 661
  • Evalue 2.90e-187
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 370.0
  • Bit_score: 660
  • Evalue 8.90e-187
rpoD1; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 370.0
  • Bit_score: 659
  • Evalue 4.00e-187

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN13A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1110
ATGGAACAAAAAGTTAAAGGTGAAGCAATAAAGGGAAAGTCAGAAAAAGATAAAAATGCAAAAATGAATGAAGTAAGAGAACTTCTTGAAAGAGGTAAAAAGAATGGTTCATTAACATATAAAGAAATAATGGAGGCAATGGATCATATTGATTTAACTCCAGAACAAATAGAAAAGATATATGAAGCATTAGAAGCAATGAGTGTAGAGATAATTGGTGATGATGTTAATGAGGCAGAAGAATTAAATGAAGATTTAGATTTATCAGTTCCAGAAGGGATAGCAATTGATGATCCGGTTAGAATGTATTTGAAAGAAATCGGAAAGGTGCCATTATTATCTTCTGAACAAGAAATAGAATATGCAAAACAAATTGAAGAAGGTAATCCAAAAGCTAAAAAGAAACTAGCTGAAGCAAACTTGAGATTGGTTGTAAGTATAGCCAAAAGATATGTTGGAAGAGGAATGCTATTTCTGGATTTAATTCAAGAAGGTAACTTAGGTCTTATAAAAGCTGTAGAGAAGTTTGATTATAGAAAAGGATATAAATTCTCAACTTATGCTACATGGTGGATTAGACAGGCGATAACAAGAGCTATTGCAGACCAAGCAAGAACAATTAGAATTCCAGTTCATATGGTTGAAACTATAAATAAGCTTATAAGAGTACAAAGACAATTATTGCAAGAACTTGGTAGAGATCCATTCCCAGAAGAAATATCAAAAGTTATGGATTTACCAGTAGATAAGGTTCGTGAAATTCAAAAAATAGCACAAGAACCAGTTTCACTAGAAACTCCTATAGGTGAAGAAGAAGATTCTCATTTAGGAGACTTTATTCCAGATGATGAAGCACCAGCACCAGCTGAAGCAGCAGCATTTACAATGCTTAAAGAACAATTAATAAATGTGTTAGATACACTAACTCCTAGAGAAGAAAAAGTATTAAGATTAAGATTTGGTCTTGATGATGGAAGAGCAAGAACTCTTGAAGAAGTAGGTAAAGAATTTAATGTAACAAGAGAAAGAATAAGACAAATTGAAGCAAAAGCATTAAGAAAGCTAAGACATCCATCAAGAAGTAAAAAGTTAAAAGATTATTTAGATTAA
PROTEIN sequence
Length: 370
MEQKVKGEAIKGKSEKDKNAKMNEVRELLERGKKNGSLTYKEIMEAMDHIDLTPEQIEKIYEALEAMSVEIIGDDVNEAEELNEDLDLSVPEGIAIDDPVRMYLKEIGKVPLLSSEQEIEYAKQIEEGNPKAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQELGRDPFPEEISKVMDLPVDKVREIQKIAQEPVSLETPIGEEEDSHLGDFIPDDEAPAPAEAAAFTMLKEQLINVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYLD*