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L2_019_000G1_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_218_1
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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330..1274
DNA (945bp) protein (315aa)
Ribosomal protein L11 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00735}; Short=L11 Mtase {ECO:0000255|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00735};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Ribosomal protein L11 methyltransferase n=2 Tax=Clostridium RepID=PRMA_CLOB8
prmA; 50S ribosomal protein L11 methyltransferase
L2_019_000G1_scaffold_218_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1295..2056
DNA (762bp) protein (254aa)
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.193)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRP2_CLOSA
L2_019_000G1_scaffold_218_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2063..3436
DNA (1374bp) protein (458aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SW84_9CLOT
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EKQ50333.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
MiaB-like tRNA modifying enzyme
L2_019_000G1_scaffold_218_4
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3824..4168
DNA (345bp) protein (115aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MIL7_9CLOT
HIT family hydrolase, diadenosine tetraphosphate hydrolase
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AGF54701.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_000G1_scaffold_218_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4306..4482
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=5 Tax=Clostridium RepID=A6LRP2_CLOB8
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_019_000G1_scaffold_218_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4512..4964
DNA (453bp) protein (151aa)
GatB/YqeY domain-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCF9_9CLOT
GatB/YqeY domain-containing protein {ECO:0000313|EMBL:EHI98071.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_019_000G1_scaffold_218_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5389..5667
DNA (279bp) protein (93aa)
Sporulation protein YqfC n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCG0_9CLOT
Sporulation protein YqfC {ECO:0000313|EMBL:EHI98072.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_019_000G1_scaffold_218_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5673..6803
DNA (1131bp) protein (377aa)
Sporulation protein YqfD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNL2_CLOSA
yqfD; sporulation protein YqfD
Sporulation protein YqfD {ECO:0000313|EMBL:AGX42103.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_218_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6836..8968
DNA (2133bp) protein (711aa)
Putative domain HDIG-containing protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMS3_CLOSA
putative domain HDIG-containing protein
Putative domain HDIG-containing protein {ECO:0000313|EMBL:AGX42104.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_218_10
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8974..9474
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
Endoribonuclease YbeY n=2 Tax=Clostridium RepID=YBEY_CLOB8
metalloprotease
L2_019_000G1_scaffold_218_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9594..10295
DNA (702bp) protein (234aa)
Diacylglycerol kinase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MR06_CLOSA
diacylglycerol kinase
Diacylglycerol kinase {ECO:0000313|EMBL:AGX42106.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_218_12
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10725..11615
DNA (891bp) protein (297aa)
GTPase Era n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M9S9_9CLOT
era; GTPase Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_000G1_scaffold_218_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11618..12997
DNA (1380bp) protein (460aa)
DNA repair protein RecO n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SW78_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
recO; DNA repair protein RecO
L2_019_000G1_scaffold_218_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13199..13837
DNA (639bp) protein (213aa)
Transcriptional repressor CcpN n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNE2_CLOSA
ccpN; transcriptional repressor CcpN
Transcriptional repressor CcpN {ECO:0000313|EMBL:AGX42110.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_218_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13932..16559
DNA (2628bp) protein (876aa)
Pyruvate, phosphate dikinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TGX5_9CLOT
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EKQ50320.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
pyruvate phosphate dikinase
L2_019_000G1_scaffold_218_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16595..17662)
DNA (1068bp) protein (356aa)
Spore coat protein, CotS family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRQ6_CLOSA
spore coat protein, CotS family
Spore coat protein, CotS family {ECO:0000313|EMBL:AGX42112.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_218_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17874..18899
DNA (1026bp) protein (342aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNL9_CLOSA
deoxyguanosinetriphosphate triphosphohydrolase-like protein
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000313|EMBL:AGX42113.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_218_18
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19110..20891
DNA (1782bp) protein (594aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
DNA primase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1U2_CLOPA
dnaG; DNA primase
L2_019_000G1_scaffold_218_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20920..22029
DNA (1110bp) protein (370aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2D3_CLOBU
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rpoD1; RNA polymerase sigma factor RpoD
L2_019_000G1_scaffold_218_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22103..22795
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LRQ8_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33038.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_019_000G1_scaffold_218_21
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22812..23600
DNA (789bp) protein (263aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LRQ9_CLOB8
hypothetical protein
L2_019_000G1_scaffold_218_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23666..23947
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNM2_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42118.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_000G1_scaffold_218_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25122..26231
DNA (1110bp) protein (370aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVD7_9CLOT
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EKQ51421.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ABC transporter
L2_019_000G1_scaffold_218_24
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26310..27275
DNA (966bp) protein (322aa)
Putative transcriptional regulator, PucR family n=1 Tax=Clostridium sp. DL-VIII RepID=G7LYB7_9CLOT
PucR family transcriptional regulator
Putative transcriptional regulator, PucR family {ECO:0000313|EMBL:EHI98178.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L2_019_000G1_scaffold_218_25
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27708..30068
DNA (2361bp) protein (787aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
glgP1; glycogen phosphorylase GlgP (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MT74_9CLOT
L2_019_000G1_scaffold_218_26
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30470..31429
DNA (960bp) protein (320aa)
hprA; glycerate dehydrogenase HprA (EC:1.1.1.29)
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TJ24_9CLOT
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EKQ51415.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_019_000G1_scaffold_218_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31617..32348
DNA (732bp) protein (244aa)
Phosphohistidinol phosphatase n=2 Tax=Clostridium butyricum RepID=C4IDC5_CLOBU
Phosphohistidinol phosphatase {ECO:0000313|EMBL:EEP55651.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PHP family phosphohydrolase, histidinol phosphatase
L2_019_000G1_scaffold_218_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33034..34473
DNA (1440bp) protein (480aa)
transporter n=1 Tax=Clostridium botulinum RepID=UPI0003075D69
Amino acid carrier family protein {ECO:0000313|EMBL:AIY81662.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
sodium:alanine symporter family protein
L2_019_000G1_scaffold_218_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34783..35055)
DNA (273bp) protein (91aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553, ECO:0000256|SAAS:SAAS00255930}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
acyP; acylphosphatase AcyP (EC:3.6.1.7)
Acylphosphatase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7R7_CLOBU
L2_019_000G1_scaffold_218_30
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35251..35658
DNA (408bp) protein (136aa)
ndk; nucleoside diphosphate kinase Ndk (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Nucleoside diphosphate kinase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MUA2_9CLOT
Displaying items 1-30 of 77 in total

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