ggKbase home page

L2_019_000G1_scaffold_546

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_546_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..81
DNA (81bp) protein (27aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2872000 RepID=M8TDC4_ECOLX
IS1 ORF2
Putative transposase {ECO:0000313|EMBL:KDA59809.1}; Flags: Fragment;; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
L2_019_000G1_scaffold_546_2
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83..1744
DNA (1662bp) protein (554aa)
transporter n=1 Tax=Kaistia granuli RepID=UPI00036C85F5
Transporter {ECO:0000313|EMBL:KKD31511.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
aspT; aspartate-alanine antiporter
L2_019_000G1_scaffold_546_3
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1790..3394
DNA (1605bp) protein (535aa)
Aspartate aminotransferase {ECO:0000313|EMBL:KKD31512.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KKD31512.1};; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
aspartate aminotransferase (EC:2.6.1.1)
aspartate aminotransferase n=1 Tax=Rhizobium meliloti RepID=UPI000314A9C8
L2_019_000G1_scaffold_546_4
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3454..3975)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pantoea sp. YR343 RepID=J3HD57_9ENTR
Polyketide cyclase {ECO:0000313|EMBL:KKD31552.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L2_019_000G1_scaffold_546_5
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4138..5064
DNA (927bp) protein (309aa)
Transcriptional regulator n=1 Tax=Pantoea sp. YR343 RepID=J2UGJ2_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KKD31513.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
transcriptional regulator, LysR family
L2_019_000G1_scaffold_546_6
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5387..5566)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Pantoea sp. Sc1 RepID=H8DTG6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KKD31514.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L2_019_000G1_scaffold_546_7
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7639..8319)
DNA (681bp) protein (227aa)
nonF; NonF-related protein (EC:3.4.-.-)
dimethylallyltransferase n=1 Tax=Enterobacter agglomerans RepID=UPI00026D2470
Dimethylallyltransferase {ECO:0000313|EMBL:KKD31515.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_546_8
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8481..9398
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI00025541DF
LysR family transcriptional regulator {ECO:0000313|EMBL:KKD31516.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
nodulation protein D 1
L2_019_000G1_scaffold_546_9
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9505..9720
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pantoea agglomerans Tx10 RepID=U4W3D6_ENTAG
Uncharacterized protein {ECO:0000313|EMBL:KKD31517.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L2_019_000G1_scaffold_546_10
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9784..10986)
DNA (1203bp) protein (401aa)
MFS transporter n=1 Tax=Pantoea agglomerans 299R RepID=L7BY54_ENTAG
Major facilitator transporter {ECO:0000313|EMBL:KKD31518.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
MFS family transporter
L2_019_000G1_scaffold_546_11
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11166..11906)
DNA (741bp) protein (247aa)
nfsA; NADPH-flavin oxidoreductase (EC:1.-.-.-)
FMN reductase n=1 Tax=Pantoea agglomerans Tx10 RepID=U4VX19_ENTAG
FMN reductase {ECO:0000313|EMBL:KKD31519.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_546_12
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11990..13366)
DNA (1377bp) protein (459aa)
Uncharacterized lipoprotein yddW n=1 Tax=Pantoea vagans (strain C9-1) RepID=D6YR90_PANVC
Lipoprotein {ECO:0000313|EMBL:KKD31553.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
yddW; Uncharacterized lipoprotein yddW
L2_019_000G1_scaffold_546_13
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13464..15611)
DNA (2148bp) protein (716aa)
Beta-glucosidase-like glycosyl hydrolase n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C106_9XANT
Beta-glucosidase {ECO:0000313|EMBL:KKD31520.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
beta-glucosidase
L2_019_000G1_scaffold_546_14
unknown

Not on your lists

comp(15911..16135)
DNA (225bp) protein (75aa)

This feature has no annotations

L2_019_000G1_scaffold_546_15
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16937..18469)
DNA (1533bp) protein (511aa)
Probable rhizopine catabolism regulatory protein mocR n=1 Tax=Pantoea vagans (strain C9-1) RepID=D6YR91_PANVC
DNA-binding protein {ECO:0000313|EMBL:KKD31554.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
mocR; rhizopine catabolism regulatory protein MocR
L2_019_000G1_scaffold_546_16
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18538..19824
DNA (1287bp) protein (429aa)
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:KKD31522.1}; EC=2.6.1.19 {ECO:0000313|EMBL:KKD31522.1};; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
gabT; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase n=1 Tax=Pantoea vagans (strain C9-1) RepID=D6YR92_PANVC
L2_019_000G1_scaffold_546_17
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19904..21319
DNA (1416bp) protein (472aa)
gamma-aminobutyrate transporter n=1 Tax=Pantoea RepID=UPI00025541D8
Gamma-aminobutyrate transporter {ECO:0000313|EMBL:KKD31523.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
gabP; GABA permease GabP
L2_019_000G1_scaffold_546_18
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21652..21963)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Pantoea vagans (strain C9-1) RepID=D6YR94_PANVC
Uncharacterized protein {ECO:0000313|EMBL:KKD31524.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L2_019_000G1_scaffold_546_19
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22385..23407)
DNA (1023bp) protein (341aa)
Uncharacterized HTH-type transcriptional regulator yhjC n=1 Tax=Pantoea vagans (strain C9-1) RepID=D6YR96_PANVC
LysR family transcriptional regulator {ECO:0000313|EMBL:KKD31555.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
HTH-type transcriptional regulator
L2_019_000G1_scaffold_546_20
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23471..24322
DNA (852bp) protein (284aa)
beta-lactamase n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI00025541D4
Beta-lactamase {ECO:0000313|EMBL:KKD31525.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L2_019_000G1_scaffold_546_21
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24404..25828)
DNA (1425bp) protein (475aa)
Putative uncharacterized protein n=1 Tax=Pantoea ananatis (strain AJ13355) RepID=F2ERR1_PANAA
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:KKD31556.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
putative amidase protein
L2_019_000G1_scaffold_546_22
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25932..26495
DNA (564bp) protein (188aa)
Bacterial regulatory s, tetR family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QJM8_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KKD31526.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L2_019_000G1_scaffold_546_23
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26584..27774)
DNA (1191bp) protein (397aa)
Putative type I secretion membrane fusion protein n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SD54_PANVC
Secretion protein HlyD {ECO:0000313|EMBL:KKD31557.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
cyad3; type I secretion membrane fusion protein
L2_019_000G1_scaffold_546_24
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27771..29981)
DNA (2211bp) protein (737aa)
cyab3; type I secretion system ATPase (EC:3.6.3.-)
Putative type I secretion system ATPase n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SD55_PANVC
ATP-binding protein {ECO:0000313|EMBL:KKD31527.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_546_25
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30013..31506)
DNA (1494bp) protein (498aa)
Putative type I secretion outer membrane protein n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SD56_PANVC
Transporter {ECO:0000313|EMBL:KKD31528.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
type I secretion outer membrane protein
L2_019_000G1_scaffold_546_26
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31617..39335)
DNA (7719bp) protein (2573aa)
Iron-regulated protein frpC n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SD57_PANVC
Uncharacterized protein {ECO:0000313|EMBL:KKD31529.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
Iron-regulated protein frpC
Displaying 26 items

View Taxonomy