ggKbase home page

L2_019_000G1_scaffold_742

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_742_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..78
DNA (78bp) protein (26aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2861200 RepID=M8V1R6_ECOLX
IS1 ORF2
Insertion element IS1 protein insB {ECO:0000313|EMBL:EOU68321.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L2_019_000G1_scaffold_742_2
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

909..3098
DNA (2190bp) protein (730aa)
Diguanylate cyclase n=1 Tax=Pantoea agglomerans Tx10 RepID=U4W1X3_ENTAG
Diguanylate cyclase {ECO:0000313|EMBL:KKD32883.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L2_019_000G1_scaffold_742_3
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3120..3806)
DNA (687bp) protein (229aa)
Isochorismatase hydrolase n=1 Tax=Pantoea sp. aB RepID=E0M3T6_9ENTR
Cysteine hydrolase {ECO:0000313|EMBL:KKD32882.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L2_019_000G1_scaffold_742_4
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3799..5103)
DNA (1305bp) protein (435aa)
cobalamin biosynthesis protein n=1 Tax=Enterobacter agglomerans RepID=UPI00026D2489
Cobalamin biosynthesis protein {ECO:0000313|EMBL:KKD32881.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
permease
L2_019_000G1_scaffold_742_5
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5100..6536)
DNA (1437bp) protein (479aa)
gata3; amidase (EC:6.3.5.-)
glutamyl-tRNA amidotransferase subunit A n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI0002553F22
Glutamyl-tRNA amidotransferase {ECO:0000313|EMBL:KKD32880.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_742_6
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6915..7484
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Enterobacter agglomerans RepID=UPI00026D248B
Uncharacterized protein {ECO:0000313|EMBL:KKD32879.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L2_019_000G1_scaffold_742_7
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7468..7683
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SHX4_PANVC
Uncharacterized protein {ECO:0000313|EMBL:KKD32878.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L2_019_000G1_scaffold_742_8
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7790..8632)
DNA (843bp) protein (281aa)
yphC; short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
short-chain dehydrogenase n=1 Tax=Enterobacter agglomerans RepID=UPI00026D248D
Short-chain dehydrogenase {ECO:0000313|EMBL:KKD32877.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_742_9
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8739..10520)
DNA (1782bp) protein (594aa)
poxb3; pyruvate dehyrdogenase (EC:2.2.1.6)
Thiamine pyrophosphate protein TPP binding domain protein n=2 Tax=Pantoea RepID=E0M3U2_9ENTR
Thiamine pyrophosphate-binding protein {ECO:0000313|EMBL:KKD32876.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_742_10
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10583..12541)
DNA (1959bp) protein (653aa)
hyuB; hydantoin utilization protein B (EC:3.5.2.14)
N-methylhydantoinase B n=1 Tax=Pantoea agglomerans 299R RepID=L7BSN1_ENTAG
Hydantoin utilization protein B {ECO:0000313|EMBL:KKD32875.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_742_11
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12543..14588)
DNA (2046bp) protein (682aa)
hyuA; hydantoin utilization protein A (EC:3.5.2.14)
Hydantoinase n=1 Tax=Pantoea agglomerans Tx10 RepID=U4VSX3_ENTAG
Hydantoinase {ECO:0000313|EMBL:KKD32874.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_742_12
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14607..15053)
DNA (447bp) protein (149aa)
spermine/spermidine acetyltransferase (EC:2.3.1.57)
Spermine/spermidine acetyltransferase n=1 Tax=Pantoea sp. Sc1 RepID=H8DRI3_9ENTR
GNAT family acetyltransferase {ECO:0000313|EMBL:KKD32873.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_742_13
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15459..15971)
DNA (513bp) protein (171aa)
Leucine-responsive regulatory protein n=2 Tax=Pantoea RepID=E1SHY0_PANVC
AsnC family transcriptional regulator {ECO:0000313|EMBL:KKD32872.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
lrp5; Leucine-responsive regulatory protein
L2_019_000G1_scaffold_742_14
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16261..17577)
DNA (1317bp) protein (439aa)
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:KKD32871.1}; EC=2.6.1.19 {ECO:0000313|EMBL:KKD32871.1};; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
gabT; 4-aminobutyrate aminotransferase (EC:2.6.1.22)
4-aminobutyrate aminotransferase n=1 Tax=Enterobacter agglomerans RepID=UPI00026D2492
L2_019_000G1_scaffold_742_15
Pantoea agglomerans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17691..18824)
DNA (1134bp) protein (378aa)
hipo3; hydrolase (EC:3.5.1.32)
amidohydrolase n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI0002553F2B
Amidohydrolase {ECO:0000313|EMBL:KDA94835.1}; TaxID=1408177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea; Pantoea agglomerans group.;" source="Pantoea agglomerans Eh318.;"
L2_019_000G1_scaffold_742_16
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18826..19752)
DNA (927bp) protein (309aa)
dehydrogenase (EC:1.1.1.95)
Probable dehydrogenase n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SHY3_PANVC
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KKD32870.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_742_17
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19752..20594)
DNA (843bp) protein (281aa)
GNAT family acetyltransferase n=1 Tax=Pantoea sp. Sc1 RepID=H8DR33_9ENTR
Histone acetyltransferase {ECO:0000313|EMBL:KKD32869.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
GNAT family acetyltransferase
L2_019_000G1_scaffold_742_18
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20604..21935)
DNA (1332bp) protein (444aa)
agaE; D-amino acid dehydrogenase 2 small subunit (EC:1.4.99.1)
D-amino acid oxidase n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI0002553F2E
D-amino acid oxidase {ECO:0000313|EMBL:KKD32868.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_742_19
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22091..23755)
DNA (1665bp) protein (555aa)
ABC transporter, ATP-binding protein n=1 Tax=Pantoea agglomerans 299R RepID=L7BUJ9_ENTAG
ABC transporter {ECO:0000313|EMBL:KKD32867.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
ophD; ABC transporter ATP-binding protein
L2_019_000G1_scaffold_742_20
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23752..24603)
DNA (852bp) protein (284aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Pantoea RepID=E0M3V3_9ENTR
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKD32866.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
ophC; ABC transporter permease
L2_019_000G1_scaffold_742_21
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24600..25556)
DNA (957bp) protein (319aa)
ABC transporter permease n=1 Tax=Pantoea agglomerans Tx10 RepID=U4VSY6_ENTAG
ABC transporter permease {ECO:0000313|EMBL:KKD32865.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
ophB; ABC transporter permease
L2_019_000G1_scaffold_742_22
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25729..27336)
DNA (1608bp) protein (536aa)
Putative ABC transport system, periplasmic solute-binding protein n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SHY9_PANVC
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKD32864.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
ophA; ABC transporter substrate-binding protein
L2_019_000G1_scaffold_742_23
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27417..28694)
DNA (1278bp) protein (426aa)
ordl1; gamma-glutamylputrescine oxidoreductase (EC:1.4.3.-)
Gamma-glutamylputrescine oxidoreductase n=1 Tax=Pantoea sp. Sc1 RepID=H8DR27_9ENTR
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KKD32863.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_742_24
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28705..29073)
DNA (369bp) protein (123aa)
Type II haloacid dehalogenase n=1 Tax=Pantoea stewartii subsp. stewartii DC283 RepID=H3RDZ2_ERWST
Dehalogenase {ECO:0000313|EMBL:KKD32862.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
hypothetical protein
L2_019_000G1_scaffold_742_25
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29018..29245)
DNA (228bp) protein (76aa)
hadL; haloacid dehalogenase (EC:3.8.1.2)
Haloacid dehalogenase n=1 Tax=Pantoea sp. Sc1 RepID=H8DR26_9ENTR
Dehalogenase {ECO:0000313|EMBL:KKD32862.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_742_26
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29274..30743)
DNA (1470bp) protein (490aa)
aldH; aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde dehydrogenase n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SHZ2_PANVC
Aldehyde dehydrogenase {ECO:0000313|EMBL:KKD32861.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
L2_019_000G1_scaffold_742_27
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31209..32666)
DNA (1458bp) protein (486aa)
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KKD32860.1}; EC=1.2.1.16 {ECO:0000313|EMBL:KKD32860.1};; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
gabd1; succinate-semialdehyde dehydrogenase (EC:1.2.1.16)
Succinic semialdehyde dehydrogenase n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SHZ5_PANVC
L2_019_000G1_scaffold_742_28
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32825..33784)
DNA (960bp) protein (320aa)
Probable RuBisCO transcriptional regulator n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SHZ6_PANVC
Transcriptional regulator Cbl {ECO:0000313|EMBL:KKD32859.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
cbl; RuBisCO transcriptional regulator
L2_019_000G1_scaffold_742_29
Pantoea vagans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33861..34715)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SGP5_PANVC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO09934.1}; TaxID=712898 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)).;"
L2_019_000G1_scaffold_742_30
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35161..36078)
DNA (918bp) protein (306aa)
Nitrogen assimilation transcriptional regulator n=1 Tax=Pantoea sp. Sc1 RepID=H8DR21_9ENTR
Nitrogen assimilation transcriptional regulator {ECO:0000313|EMBL:KKD32858.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
nac; RuBisCO transcriptional regulator
Displaying items 1-30 of 39 in total

View Taxonomy