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L2_019_000G1_scaffold_1195

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_1195_1
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

394..948
DNA (555bp) protein (185aa)
carbonic anhydrase n=1 Tax=Enterobacter agglomerans RepID=UPI00026D2966
Uncharacterized protein {ECO:0000313|EMBL:KKD30082.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
yrdA; carnitine operon protein caiE
L2_019_000G1_scaffold_1195_2
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(915..1172)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Pantoea agglomerans Tx10 RepID=U4W138_ENTAG
Uncharacterized protein {ECO:0000313|EMBL:KKD30081.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
yrdB; hypothetical protein
L2_019_000G1_scaffold_1195_3
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1169..1987)
DNA (819bp) protein (273aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
aroE; dehydroshikimate reductase (EC:1.1.1.25)
shikimate 5-dehydrogenase n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI00025545C7
L2_019_000G1_scaffold_1195_4
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1991..2563)
DNA (573bp) protein (191aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
Threonylcarbamoyl-AMP synthase n=1 Tax=Pantoea sp. Sc1 RepID=H8DRD7_9ENTR
yrdC; hypothetical protein
L2_019_000G1_scaffold_1195_5
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2570..3115)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Pantoea agglomerans Tx10 RepID=U4VWU4_ENTAG
Uncharacterized protein {ECO:0000313|EMBL:KKD30078.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
yrdD; hypothetical protein
L2_019_000G1_scaffold_1195_6
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3140..3613)
DNA (474bp) protein (158aa)
Protein Smg n=1 Tax=Pantoea sp. Sc1 RepID=H8DRD9_9ENTR
Protein Smg {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
smg; protein Smg
L2_019_000G1_scaffold_1195_7
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3585..4700)
DNA (1116bp) protein (372aa)
Protein smf n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SG50_PANVC
DNA processing protein DprA {ECO:0000313|EMBL:KKD30076.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
smf; protein smf
L2_019_000G1_scaffold_1195_8
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4816..5328
DNA (513bp) protein (171aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Pantoea sp. Sc1 RepID=H8DRE1_9ENTR
L2_019_000G1_scaffold_1195_9
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5349..6293
DNA (945bp) protein (315aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SG52_PANVC
L2_019_000G1_scaffold_1195_10
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6343..7644
DNA (1302bp) protein (434aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
sun; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
16S rRNA methyltransferase n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI00025545CE
L2_019_000G1_scaffold_1195_11
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7663..9039
DNA (1377bp) protein (459aa)
Trk system potassium uptake protein trkA n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SG54_PANVC
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:KKD30072.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
trkA; Trk system potassium uptake protein trkA
L2_019_000G1_scaffold_1195_12
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9161..9571
DNA (411bp) protein (137aa)
Large-conductance mechanosensitive channel n=1 Tax=Pantoea sp. Sc1 RepID=H8DRE5_9ENTR
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
mscL; Large-conductance mechanosensitive channel
L2_019_000G1_scaffold_1195_13
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9507..9806)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Pantoea sp. Sc1 RepID=H8DRE6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KKB06453.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
cytoplasmic protein YhdL
L2_019_000G1_scaffold_1195_14
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9866..10282)
DNA (417bp) protein (139aa)
HTH-type transcriptional regulator zntR n=1 Tax=Pantoea vagans (strain C9-1) RepID=E1SG56_PANVC
Zinc-responsive transcriptional regulator {ECO:0000313|EMBL:KKD30070.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
zntR; HTH-type transcriptional regulator zntR
L2_019_000G1_scaffold_1195_15
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10283..10654)
DNA (372bp) protein (124aa)
Putative cytoplasmic protein n=1 Tax=Pantoea agglomerans 299R RepID=L7BUQ0_ENTAG
Uncharacterized protein {ECO:0000313|EMBL:KKD30069.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
yhdN; hypothetical protein
L2_019_000G1_scaffold_1195_16
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10752..11138)
DNA (387bp) protein (129aa)
50S ribosomal protein L17 n=1 Tax=Pantoea sp. Sc1 RepID=H8DRE9_9ENTR
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=66269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea stewartii.;"
rplQ; 50S ribosomal protein L17
L2_019_000G1_scaffold_1195_17
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11179..12168)
DNA (990bp) protein (330aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
DNA-directed RNA polymerase subunit alpha n=6 Tax=Pantoea RepID=E1SG59_PANVC
L2_019_000G1_scaffold_1195_18
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12194..12814)
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=4 Tax=Pantoea RepID=E1SG60_PANVC
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
L2_019_000G1_scaffold_1195_19
Erwinia tasmaniensis, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12847..13236)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=35 Tax=Enterobacteriaceae RepID=RS11_ERWT9
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=338565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia tasmaniensis (strain DSM 17950 / Et1/99).;"
L2_019_000G1_scaffold_1195_20
Pantoea sp. aB, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13253..13609)
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=11 Tax=Pantoea RepID=D4GCF6_PANAM
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=517433 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. aB.;"
L2_019_000G1_scaffold_1195_21
Pantoea sp. YR343, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13756..13872)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=26 Tax=Enterobacteriaceae RepID=B2VK75_ERWT9
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1144341 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. YR343.;"
L2_019_000G1_scaffold_1195_22
Pantoea agglomerans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13905..15236)
DNA (1332bp) protein (444aa)
Protein translocase subunit SecY n=4 Tax=Pantoea RepID=E1SG64_PANVC
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1408177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea; Pantoea agglomerans group.;" source="Pantoea agglomerans Eh318.;"
L2_019_000G1_scaffold_1195_23
Pantoea sp. YR343, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15244..15678)
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=2 Tax=Pantoea RepID=J2KVN4_9ENTR
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1144341 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. YR343.;"
rplO; 50S ribosomal protein L15
L2_019_000G1_scaffold_1195_24
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15682..15861)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=11 Tax=Enterobacteriaceae RepID=RL30_ERWCT
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
rpmD; 50S ribosomal protein L30
L2_019_000G1_scaffold_1195_25
Pantoea sp. aB, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15867..16367)
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=5 Tax=Pantoea RepID=E1SG67_PANVC
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=517433 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. aB.;"
L2_019_000G1_scaffold_1195_26
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16382..16735)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=6 Tax=Pantoea RepID=E1SG68_PANVC
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
rplR; 50S ribosomal protein L18
L2_019_000G1_scaffold_1195_27
Pantoea agglomerans, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16745..17278)
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=3 Tax=Pantoea RepID=E0M4T4_9ENTR
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1408177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea; Pantoea agglomerans group.;" source="Pantoea agglomerans Eh318.;"
rplF; 50S ribosomal protein L6
L2_019_000G1_scaffold_1195_28
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17291..17683)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Pantoea stewartii subsp. stewartii DC283 RepID=H3RGF5_ERWST
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
rpsH; 30S ribosomal protein S8
L2_019_000G1_scaffold_1195_29
Plautia stali symbiont, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17716..18021)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=2 Tax=Enterobacteriaceae RepID=U3U3W6_9ENTR
rpsN; RpsN protein
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=891974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Plautia stali symbiont.;"
L2_019_000G1_scaffold_1195_30
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18036..18575)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=3 Tax=Pantoea RepID=E6WGK8_PANSA
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
Displaying items 1-30 of 49 in total

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