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L2_019_000G1_scaffold_280

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_280_1
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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495..1931
DNA (1437bp) protein (479aa)
Cytochrome D ubiquinol oxidase subunit I n=3 Tax=Lactobacillus fermentum RepID=D8IGR6_LACFC
cytochrome D ubiquinol oxidase subunit I
Bacterial cytochrome ubiquinol oxidase {ECO:0000313|EMBL:EEI22914.1}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
L2_019_000G1_scaffold_280_2
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1933..2949
DNA (1017bp) protein (339aa)
Cytochrome D ubiquinol oxidase subunit II n=5 Tax=Lactobacillus fermentum RepID=D8IGR7_LACFC
Cytochrome d ubiquinol oxidase, subunit II
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:AGL88206.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L2_019_000G1_scaffold_280_3
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2949..4679
DNA (1731bp) protein (577aa)
Cytochrome D ABC transporter ATP-binding and permease components n=1 Tax=Lactobacillus fermentum (strain NBRC 3956 / LMG 18251) RepID=B2GAC9_LACF3
cytochrome D ABC transporter ATP-binding and permease components
Thiol reductant ABC exporter, CydD subunit {ECO:0000313|EMBL:EEX25463.1}; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
L2_019_000G1_scaffold_280_4
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4669..6420
DNA (1752bp) protein (584aa)
Cytochrome D ABC transporter ATP-binding and permease components n=4 Tax=Lactobacillus fermentum RepID=B2GAD0_LACF3
cytochrome D ABC transporter ATP-binding and permease components
Cytochrome D ABC transporter ATP-binding and permease components {ECO:0000313|EMBL:BAG26612.1}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
L2_019_000G1_scaffold_280_5
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6899..9502
DNA (2604bp) protein (868aa)
Aldehyde-alcohol dehydrogenase 2 n=2 Tax=Lactobacillus fermentum RepID=D0DU88_LACFE
Acetaldehyde dehydrogenase (Acetylating)
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
L2_019_000G1_scaffold_280_6
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10020..11399
DNA (1380bp) protein (460aa)
Branched-chain amino acid transport system II carrier protein n=3 Tax=Lactobacillus fermentum RepID=D0DU87_LACFE
branched-chain amino acid transporter
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:ERJ51339.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L2_019_000G1_scaffold_280_7
Lactobacillus coleohominis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(11532..13544)
DNA (2013bp) protein (671aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=575594 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus coleohominis 101-4-CHN.;"
Beta-galactosidase n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVD3_9LACO
beta-galactosidase
L2_019_000G1_scaffold_280_8
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13537..14532)
DNA (996bp) protein (332aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Lactobacillus reuteri 100-23 RepID=B3XPJ4_LACRE
Phosphotransferase enzyme IIA component {ECO:0000313|EMBL:KEK16194.1}; TaxID=1598 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri.;"
PTS sugar transporter subunit IIA
L2_019_000G1_scaffold_280_9
Lactobacillus mucosae, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(14536..14982)
DNA (447bp) protein (149aa)
Sugar transporter n=1 Tax=Lactobacillus mucosae LM1 RepID=H3RR87_9LACO
phosphotransferase enzyme IIA component
Phosphotransferase enzyme IIA component {ECO:0000313|EMBL:AJT51091.1}; TaxID=1130798 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus mucosae LM1.;"
L2_019_000G1_scaffold_280_10
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15115..16137)
DNA (1023bp) protein (341aa)
Transcriptional regulator, LacI family n=4 Tax=Lactobacillus reuteri RepID=A5VKH0_LACRD
lactose operon repressor
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEI08330.1}; TaxID=585517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri MM2-3.;"
L2_019_000G1_scaffold_280_11
Lactobacillus mucosae, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16448..17242
DNA (795bp) protein (265aa)
Acetoin dehydrogenase n=1 Tax=Lactobacillus mucosae LM1 RepID=H3RQX9_9LACO
Diacetyl reductase {ECO:0000313|EMBL:KGL66542.1}; TaxID=97478 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus mucosae.;"
diacetyl reductase
L2_019_000G1_scaffold_280_12
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17312..18313)
DNA (1002bp) protein (334aa)
Ribonucleoside-diphosphate reductase, beta subunit {ECO:0000313|EMBL:EEI22920.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EEI22920.1};; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Lactobacillus fermentum ATCC 14931 RepID=C0WVJ1_LACFE
ribonucleoside-diphosphate reductase subunit beta
L2_019_000G1_scaffold_280_13
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18375..20546)
DNA (2172bp) protein (724aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
Ribonucleoside-diphosphate reductase n=1 Tax=Lactobacillus fermentum MTCC 8711 RepID=T0TMF1_LACFE
Ribonucleoside-diphosphate reductase, alpha subunit
L2_019_000G1_scaffold_280_14
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20646..20867)
DNA (222bp) protein (74aa)
Ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit n=7 Tax=Lactobacillus fermentum RepID=R4RUY6_LACFE
Ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit
Glutaredoxin {ECO:0000313|EMBL:ERJ55297.2}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L2_019_000G1_scaffold_280_15
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21124..21648
DNA (525bp) protein (175aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
Cytosine/adenosine deaminase n=5 Tax=Lactobacillus fermentum RepID=B2GAD6_LACF3
cytosine/adenosine deaminase
L2_019_000G1_scaffold_280_16
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21904..23595
DNA (1692bp) protein (564aa)
DNA-directed DNA polymerase III gamma/tau subunit n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RFY6_LACFE
DNA-directed DNA polymerase III gamma/tau subunit
DNA-directed DNA polymerase III gamma/tau subunit {ECO:0000313|EMBL:AGL88215.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L2_019_000G1_scaffold_280_17
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23618..23926
DNA (309bp) protein (103aa)
Nucleoid-associated protein LAF_0284 n=8 Tax=Lactobacillus fermentum RepID=B2GAD8_LACF3
UPF0133 protein ybcG
Nucleoid-associated protein N573_09380 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L2_019_000G1_scaffold_280_18
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23942..24541
DNA (600bp) protein (200aa)
Recombination protein RecR n=7 Tax=Lactobacillus fermentum RepID=RECR_LACF3
recR; Recombination protein recR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L2_019_000G1_scaffold_280_19
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24543..24791
DNA (249bp) protein (83aa)
Uncharacterized protein n=7 Tax=Lactobacillus fermentum RepID=R4RUZ0_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJY07123.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L2_019_000G1_scaffold_280_20
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24811..25455
DNA (645bp) protein (215aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000256|SAAS:SAAS00031932};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
Thymidylate kinase n=1 Tax=Lactobacillus fermentum MTCC 8711 RepID=T0SBX6_LACFE
tmk; Thymidylate kinase
L2_019_000G1_scaffold_280_21
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25468..25788
DNA (321bp) protein (107aa)
Uncharacterized protein n=3 Tax=Lactobacillus fermentum RepID=R4RFY8_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ54905.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L2_019_000G1_scaffold_280_22
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25806..26846
DNA (1041bp) protein (347aa)
DNA polymerase III subunit delta n=1 Tax=Lactobacillus fermentum MTCC 8711 RepID=T0SIP6_LACFE
DNA polymerase III subunit delta {ECO:0000313|EMBL:EQC58742.1}; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
DNA polymerase III subunit delta'
L2_019_000G1_scaffold_280_23
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26839..27174
DNA (336bp) protein (112aa)
Regulator of replication initiation timing n=7 Tax=Lactobacillus fermentum RepID=R4RR91_LACFE
Regulator of replication initiation timing
Initiation-control protein YabA {ECO:0000256|SAAS:SAAS00063209}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L2_019_000G1_scaffold_280_24
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27177..28037
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Lactobacillus fermentum MTCC 8711 RepID=T0TMF8_LACFE
methyltransferase
L2_019_000G1_scaffold_280_25
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28057..28812
DNA (756bp) protein (252aa)
Acyl-ACP thioesterase n=5 Tax=Lactobacillus fermentum RepID=C0WVK4_LACFE
putative acyl-ACP thioesterase
Uncharacterized protein {ECO:0000313|EMBL:CDI69082.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L2_019_000G1_scaffold_280_26
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28942..30444
DNA (1503bp) protein (501aa)
Exopolyphosphatase n=1 Tax=Lactobacillus fermentum 3872 RepID=U2HHZ1_LACFE
Uncharacterized protein {ECO:0000313|EMBL:EEI22935.1}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
Exopolyphosphatase
L2_019_000G1_scaffold_280_27
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30445..32673
DNA (2229bp) protein (743aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
Polyphosphate kinase n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RR97_LACFE
Polyphosphate kinase
L2_019_000G1_scaffold_280_28
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32687..33640
DNA (954bp) protein (318aa)
Exopolyphosphatase n=2 Tax=Lactobacillus fermentum RepID=B2GAE9_LACF3
Exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:KIL02220.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L2_019_000G1_scaffold_280_29
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33730..34725
DNA (996bp) protein (332aa)
UDP-glucose 4-epimerase n=7 Tax=Lactobacillus fermentum RepID=B2GAF0_LACF3
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase {ECO:0000313|EMBL:BAG26632.1}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
L2_019_000G1_scaffold_280_30
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34946..35797)
DNA (852bp) protein (284aa)
Chemotaxis protein CheY n=1 Tax=Lactobacillus fermentum NB-22 RepID=V4XIU5_LACFE
Chemotaxis protein CheY {ECO:0000313|EMBL:KJY07113.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
two-component response regulator
Displaying items 1-30 of 59 in total

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