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L2_019_000G1_scaffold_500

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_500_1
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)
Integrase catalytic region n=1 Tax=Lactobacillus mucosae LM1 RepID=H3RQT8_9LACO
integrase
Transposase, IS30 family {ECO:0000313|EMBL:AGN99117.1}; TaxID=1340495 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri I5007.;"
L2_019_000G1_scaffold_500_2
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(263..1303)
DNA (1041bp) protein (347aa)
Exopolysaccharide pyruvyl transferase n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2Q0Y3_LACPA
Exopolysaccharide pyruvyl transferase {ECO:0000313|EMBL:EPC89850.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
exopolysaccharide biosynthesis protein
L2_019_000G1_scaffold_500_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1305..2270)
DNA (966bp) protein (322aa)
epsJ; putative glycosyltransferase EpsJ (EC:2.4.-.-)
Glycosyl transferase n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2LJJ3_LACPA
Eps7F {ECO:0000313|EMBL:EPC89849.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_019_000G1_scaffold_500_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2280..3410)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2MB29_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC89848.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
hypothetical protein
L2_019_000G1_scaffold_500_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3420..4412)
DNA (993bp) protein (331aa)
Glycosyl transferase, family 2 n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2LJ50_LACPA
Glycosyltransferase-like protein {ECO:0000313|EMBL:EPC89847.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
hypothetical protein
L2_019_000G1_scaffold_500_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4418..5824)
DNA (1407bp) protein (469aa)
Polysaccharide biosynthesis protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2LM39_LACPA
Exopolysacharide protein Wzx {ECO:0000313|EMBL:EPC89846.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
hypothetical protein
L2_019_000G1_scaffold_500_7
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5949..6773)
DNA (825bp) protein (275aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEX26259.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEX26259.1};; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DSJ8_LACFE
glycosyltransferase
L2_019_000G1_scaffold_500_8
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7015..8193)
DNA (1179bp) protein (393aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEX26258.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEX26258.1};; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DSJ7_LACFE
glycosyltransferase
L2_019_000G1_scaffold_500_9
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8266..8859)
DNA (594bp) protein (198aa)
Bacterial sugar transferase n=1 Tax=Lactobacillus fermentum ATCC 14931 RepID=C0WW28_LACFE
UDP-phosphate galactose phosphotransferase {ECO:0000313|EMBL:KIL02088.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
capsular polysaccharide synthesis protein
L2_019_000G1_scaffold_500_10
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8879..9649)
DNA (771bp) protein (257aa)
PHP domain protein {ECO:0000313|EMBL:EEX26256.1}; EC=3.1.3.- {ECO:0000313|EMBL:EEX26256.1};; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
PHP domain protein n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DSJ5_LACFE
Exopolysaccharide biosynthesis protein
L2_019_000G1_scaffold_500_11
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9676..10422)
DNA (747bp) protein (249aa)
Capsular exopolysaccharide family n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DSJ4_LACFE
Capsular exopolysaccharide family {ECO:0000313|EMBL:EEX26255.1}; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
exopolysaccharide biosynthesis protein
L2_019_000G1_scaffold_500_12
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10439..11209)
DNA (771bp) protein (257aa)
Capsular polysaccharide biosynthesis protein cpsC n=1 Tax=Lactobacillus fermentum (strain CECT 5716) RepID=D8IGF9_LACFC
capsular polysaccharide biosynthesis protein cpsC
Capsular polysaccharide biosynthesis protein cpsC {ECO:0000313|EMBL:ADJ40740.1}; TaxID=712938 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain CECT 5716).;"
L2_019_000G1_scaffold_500_13
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11209..12216)
DNA (1008bp) protein (336aa)
LytR family transcriptional regulator n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RI24_LACFE
LytR family transcriptional regulator
LytR family transcriptional regulator {ECO:0000313|EMBL:AGL88006.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L2_019_000G1_scaffold_500_14
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12563..13705)
DNA (1143bp) protein (381aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964};; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Lactobacillus fermentum RepID=C0WW23_LACFE
Inosine-5'-monophosphate dehydrogenase
L2_019_000G1_scaffold_500_15
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13962..14735)
DNA (774bp) protein (258aa)
Membrane protein n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RUA2_LACFE
Membrane protein
Membrane protein {ECO:0000313|EMBL:ERJ50238.2}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L2_019_000G1_scaffold_500_16
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14769..15866)
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=3 Tax=Lactobacillus fermentum RepID=B2GF26_LACF3
GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
L2_019_000G1_scaffold_500_17
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15882..16082)
DNA (201bp) protein (67aa)
Uncharacterized protein n=3 Tax=Lactobacillus fermentum RepID=C0WW19_LACFE
Uncharacterized protein {ECO:0000313|EMBL:EEX26249.1}; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
hypothetical protein
L2_019_000G1_scaffold_500_18
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16095..16928)
DNA (834bp) protein (278aa)
Stage 0 sporulation protein J n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DSI7_LACFE
Stage 0 sporulation protein J {ECO:0000313|EMBL:EEX26248.1}; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
chromosome partitioning protein ParB
L2_019_000G1_scaffold_500_19
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16942..17877)
DNA (936bp) protein (312aa)
ParB-like protein n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DSI6_LACFE
ParB-like protein {ECO:0000313|EMBL:EEX26247.1}; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
Stage 0 DNA-binding protein
L2_019_000G1_scaffold_500_20
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17896..18657)
DNA (762bp) protein (254aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Lactobacillus fermentum RepID=R4RU99_LACFE
gidB; 16S rRNA methyltransferase GidB
L2_019_000G1_scaffold_500_21
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18822..19742)
DNA (921bp) protein (307aa)
ribosylpyrimidine nucleosidase (EC:3.2.2.8)
Possible ribosylpyrimidine nucleosidase n=7 Tax=Lactobacillus fermentum RepID=D8IGF0_LACFC
Ribonucleoside hydrolase {ECO:0000313|EMBL:EQC58595.1}; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
L2_019_000G1_scaffold_500_22
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19976..21175)
DNA (1200bp) protein (400aa)
Nucleoside transporter n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RQR7_LACFE
Nucleoside transporter
Nucleoside transporter {ECO:0000313|EMBL:AGL87997.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L2_019_000G1_scaffold_500_23
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22047..23420)
DNA (1374bp) protein (458aa)
Alanine glycine permease n=2 Tax=Lactobacillus fermentum RepID=V4XPH7_LACFE
Alanine glycine permease {ECO:0000313|EMBL:ESS01926.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
APC family amino acid-polyamine-organocation transporter
L2_019_000G1_scaffold_500_24
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23878..24621)
DNA (744bp) protein (248aa)
Glutamine ABC transporter, ATP-binding protein GlnQ n=2 Tax=Lactobacillus fermentum RepID=D0DSI1_LACFE
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESS01925.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
glutamine ABC transporter ATP-binding protein
L2_019_000G1_scaffold_500_25
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24625..26079)
DNA (1455bp) protein (485aa)
Glutamine ABC transporter substrate-binding protein n=1 Tax=Lactobacillus fermentum NB-22 RepID=V4X323_LACFE
Glutamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJY07502.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
glutamate ABC superfamily ATP binding cassette transporter, membrane protein
L2_019_000G1_scaffold_500_26
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26548..27801
DNA (1254bp) protein (418aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
Tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Lactobacillus fermentum (strain CECT 5716) RepID=D8IGE5_LACFC
L2_019_000G1_scaffold_500_27
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28059..29072
DNA (1014bp) protein (338aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
Tryptophan--tRNA ligase n=2 Tax=Lactobacillus fermentum RepID=D0DSH8_LACFE
Tryptophanyl-tRNA synthetase II
L2_019_000G1_scaffold_500_28
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29565..30863)
DNA (1299bp) protein (433aa)
Serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; Short=SerRS {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
Serine--tRNA ligase n=2 Tax=Lactobacillus fermentum RepID=SYS_LACF3
seryl-tRNA synthetase
L2_019_000G1_scaffold_500_29
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31151..34255)
DNA (3105bp) protein (1035aa)
Putative DNA sulfur modification protein DndD n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DSH5_LACFE
Putative DNA sulfur modification protein DndD {ECO:0000313|EMBL:EEX26236.1}; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
exonuclease SbcC
L2_019_000G1_scaffold_500_30
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34252..35385)
DNA (1134bp) protein (378aa)
Exonuclease SbcD n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RQQ8_LACFE
Exonuclease SbcD {ECO:0000313|EMBL:KJY07507.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
Exonuclease SbcD
Displaying items 1-30 of 35 in total

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