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L2_019_000G1_scaffold_731

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_731_1
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

119..877
DNA (759bp) protein (253aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
Phosphate ABC transporter ATP-binding protein n=1 Tax=Lactobacillus fermentum NB-22 RepID=V4ZHT7_LACFE
Phosphate ABC transporter ATP-binding component
L2_019_000G1_scaffold_731_2
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1034..2119)
DNA (1086bp) protein (362aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
Isopentenyl-diphosphate delta-isomerase n=5 Tax=Lactobacillus fermentum RepID=B2GCZ9_LACF3
Isopentenyl-diphosphate delta-isomerase, type 2
L2_019_000G1_scaffold_731_3
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2175..3284)
DNA (1110bp) protein (370aa)
Phosphomevalonate kinase n=2 Tax=Lactobacillus fermentum RepID=B2GCZ8_LACF3
phosphomevalonate kinase
Phosphomevalonate kinase {ECO:0000313|EMBL:CDI69812.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L2_019_000G1_scaffold_731_4
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3304..4293)
DNA (990bp) protein (330aa)
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:EEI22095.1}; EC=4.1.1.33 {ECO:0000313|EMBL:EEI22095.1};; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
Diphosphomevalonate decarboxylase n=2 Tax=Lactobacillus fermentum RepID=C0WXX0_LACFE
Mevalonate diphosphate decarboxylase
L2_019_000G1_scaffold_731_5
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4295..5230)
DNA (936bp) protein (312aa)
Mevalonate kinase n=3 Tax=Lactobacillus fermentum RepID=C0WXX1_LACFE
Mevalonate kinase {ECO:0000313|EMBL:KJY08052.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
Mevalonate kinase
L2_019_000G1_scaffold_731_6
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5460..8300
DNA (2841bp) protein (947aa)
XRE family transcriptional regulator n=2 Tax=Lactobacillus fermentum RepID=V4ZHT3_LACFE
XRE family transcriptional regulator {ECO:0000313|EMBL:ESS01765.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
DNA-directed DNA polymerase III epsilon subunit
L2_019_000G1_scaffold_731_7
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8351..8869
DNA (519bp) protein (173aa)
Peptidase propeptide and ypeb domain-containing protein n=5 Tax=Lactobacillus fermentum RepID=R4RXL1_LACFE
Peptidase {ECO:0000313|EMBL:KJY08050.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
hypothetical protein
L2_019_000G1_scaffold_731_8
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8896..10191
DNA (1296bp) protein (432aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
Asparagine--tRNA ligase n=3 Tax=Lactobacillus fermentum RepID=D0DTS8_LACFE
Asparaginyl-tRNA synthetase 2
L2_019_000G1_scaffold_731_9
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10283..11011
DNA (729bp) protein (243aa)
DNA replication protein DnaD n=6 Tax=Lactobacillus fermentum RepID=B2GCZ2_LACF3
DNA replication protein DnaD
DNA replication protein DnaD {ECO:0000313|EMBL:ERJ52559.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L2_019_000G1_scaffold_731_10
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11111..12118
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Lactobacillus fermentum ATCC 14931 RepID=C0WXX6_LACFE
Extracellular protein {ECO:0000313|EMBL:KJY08047.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
Extracellular protein
L2_019_000G1_scaffold_731_11
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12310..13323)
DNA (1014bp) protein (338aa)
Oxidoreductase n=2 Tax=Lactobacillus fermentum RepID=B2GCZ0_LACF3
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:KJY08046.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
oxidoreductase
L2_019_000G1_scaffold_731_12
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13452..14363
DNA (912bp) protein (304aa)
Transport protein n=5 Tax=Lactobacillus fermentum RepID=B2GCY9_LACF3
Drug/metabolite exporter family transporter
Membrane protein {ECO:0000313|EMBL:KJY08045.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L2_019_000G1_scaffold_731_13
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14470..16734)
DNA (2265bp) protein (755aa)
Penicillin-binding protein, 1A family n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DTS3_LACFE
Carboxypeptidase {ECO:0000313|EMBL:KJY08044.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
Peptidoglycan glycosyltransferase
L2_019_000G1_scaffold_731_14
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16727..17362)
DNA (636bp) protein (212aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
Holliday junction resolvase RecU n=2 Tax=Lactobacillus fermentum RepID=U2H742_LACFE
recU; Holliday junction resolvase recU
L2_019_000G1_scaffold_731_15
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17453..18049
DNA (597bp) protein (199aa)
UPF0398 protein n=2 Tax=Lactobacillus fermentum RepID=R4RIM4_LACFE
Uncharacterized protein {ECO:0000313|EMBL:KJY08042.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
UPF0398 protein
L2_019_000G1_scaffold_731_16
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18157..18516
DNA (360bp) protein (120aa)
Cell cycle protein GpsB n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RXI4_LACFE
Cell division protein
Cell cycle protein GpsB {ECO:0000256|HAMAP-Rule:MF_02011, ECO:0000256|SAAS:SAAS00023627}; Guiding PBP1-shuttling protein {ECO:0000256|HAMAP-Rule:MF_02011}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L2_019_000G1_scaffold_731_17
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18584..18706
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Lactobacillus fermentum MTCC 8711 RepID=T0SNF3_LACFE
Uncharacterized protein {ECO:0000313|EMBL:EQC60162.1}; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
L2_019_000G1_scaffold_731_18
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19169..21103
DNA (1935bp) protein (645aa)
Elongation factor G n=1 Tax=Lactobacillus fermentum NB-22 RepID=V4XP23_LACFE
Elongation factor G {ECO:0000313|EMBL:ESS01776.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
elongation factor G
L2_019_000G1_scaffold_731_19
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21241..22392
DNA (1152bp) protein (384aa)
ATPase n=1 Tax=Lactobacillus fermentum NB-22 RepID=V4ZHU1_LACFE
ATPase {ECO:0000313|EMBL:ESS01775.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
ATPase
L2_019_000G1_scaffold_731_20
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22396..22845
DNA (450bp) protein (150aa)
NTP pyrophosphohydrolase n=7 Tax=Lactobacillus fermentum RepID=B2GCY2_LACF3
NTP pyrophosphohydrolase
NTP pyrophosphohydrolase {ECO:0000313|EMBL:ERJ51147.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L2_019_000G1_scaffold_731_21
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22888..24021
DNA (1134bp) protein (378aa)
Uncharacterized protein n=3 Tax=Lactobacillus fermentum RepID=C0WXY6_LACFE
hypothetical protein
RNA methyltransferase {ECO:0000313|EMBL:ESS01773.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
L2_019_000G1_scaffold_731_22
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24166..25098)
DNA (933bp) protein (311aa)
C4-dicarboxylate ABC transporter n=1 Tax=Lactobacillus fermentum NB-22 RepID=V4XT42_LACFE
Arginine:ornithine antiporter {ECO:0000313|EMBL:KJY08037.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
hypothetical protein
L2_019_000G1_scaffold_731_23
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25249..26682)
DNA (1434bp) protein (478aa)
Amidase {ECO:0000313|EMBL:EEX25664.1}; EC=3.5.1.4 {ECO:0000313|EMBL:EEX25664.1};; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
Amidase n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DTR4_LACFE
amidase
L2_019_000G1_scaffold_731_24
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27503..29527
DNA (2025bp) protein (675aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus fermentum (strain NBRC 3956 / LMG 18251) RepID=B2GCX7_LACF3
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAG27509.1}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
Displaying 24 items

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