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L2_019_000G1_scaffold_3439

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000G1_scaffold_3439_1
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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395..1813
DNA (1419bp) protein (473aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
Cysteine--tRNA ligase n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RFW7_LACFE
cysS; Cysteinyl-tRNA synthetase
L2_019_000G1_scaffold_3439_2
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1844..2233
DNA (390bp) protein (130aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
Mini-ribonuclease 3 n=6 Tax=Lactobacillus fermentum RepID=B2GAB6_LACF3
Ribonuclease III
L2_019_000G1_scaffold_3439_3
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2223..2978
DNA (756bp) protein (252aa)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Lactobacillus fermentum RepID=D0DUA2_LACFE
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:CDI69470.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
RNA methyltransferase, TrmH family, group 3
L2_019_000G1_scaffold_3439_4
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3216..3794
DNA (579bp) protein (193aa)
RNA polymerase sigma-30 factor n=4 Tax=Lactobacillus fermentum RepID=B2GAB8_LACF3
RNA polymerase sigma-30 factor
RNA polymerase subunit sigma-30 {ECO:0000313|EMBL:ERJ51871.2}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L2_019_000G1_scaffold_3439_5
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3859..4005
DNA (147bp) protein (49aa)
50S ribosomal protein L33 1 n=5 Tax=Lactobacillus fermentum RepID=RL331_LACF3
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
L2_019_000G1_scaffold_3439_6
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4020..4196
DNA (177bp) protein (59aa)
Protein translocase subunit SecE n=4 Tax=Lactobacillus fermentum RepID=B2GAC0_LACF3
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
L2_019_000G1_scaffold_3439_7
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4251..4850
DNA (600bp) protein (200aa)
Transcription termination/antitermination protein NusG n=2 Tax=Lactobacillus fermentum RepID=U2IN57_LACFE
transcription antitermination protein
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L2_019_000G1_scaffold_3439_8
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


5075..5395
DNA (321bp) protein (107aa)
50S ribosomal protein L11 n=7 Tax=Lactobacillus fermentum RepID=RL11_LACF3
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
L2_019_000G1_scaffold_3439_9
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5489..6181
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=2 Tax=Lactobacillus fermentum RepID=D0DU96_LACFE
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
50S ribosomal protein L1
Displaying 9 items

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