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L2_019_000M1_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000M1_scaffold_29_1
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(240..713)
DNA (474bp) protein (158aa)
Flavodoxins n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8Z6_9FIRM
Flavodoxins
Flavodoxins {ECO:0000313|EMBL:CBL16091.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_2
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(734..1168)
DNA (435bp) protein (145aa)
Uncharacterized conserved protein, contains double-stranded beta-helix domain n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8Z7_9FIRM
Uncharacterized conserved protein, contains double-stranded beta-helix domain
Uncharacterized conserved protein, contains double-stranded beta-helix domain {ECO:0000313|EMBL:CBL16092.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_3
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1189..1695)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8Z8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16093.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_4
unknown

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comp(1749..1889)
DNA (141bp) protein (47aa)

This feature has no annotations

L2_019_000M1_scaffold_29_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2064..2522)
DNA (459bp) protein (153aa)
Transcriptional repressor NrdR n=3 Tax=root RepID=D4L8Z9_9FIRM
transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_6
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2622..3974)
DNA (1353bp) protein (451aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRH9_9FIRM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CCX81414.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_019_000M1_scaffold_29_7
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4002..6047)
DNA (2046bp) protein (682aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CBL16096.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBL16096.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
ATP-dependent DNA helicase RecG n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L901_9FIRM
L2_019_000M1_scaffold_29_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6122..7768)
DNA (1647bp) protein (549aa)
DAK2 domain fusion protein YloV n=2 Tax=root RepID=R5DXR4_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:CCX81412.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
DAK2 domain fusion protein YloV
L2_019_000M1_scaffold_29_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7991..8764)
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DME1_9FIRM
conserved hypothetical protein TIGR00282
Uncharacterized protein {ECO:0000313|EMBL:CBL16098.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_10
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8846..10024)
DNA (1179bp) protein (393aa)
Putative stage IV sporulation protein YqfD n=2 Tax=root RepID=D4L904_9FIRM
Putative stage IV sporulation protein YqfD.
Putative stage IV sporulation protein YqfD {ECO:0000313|EMBL:CBL16099.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_11
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10034..10306)
DNA (273bp) protein (91aa)
Putative sporulation protein YqfC n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMD6_9FIRM
Putative sporulation protein YqfC {ECO:0000313|EMBL:CCX81405.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_019_000M1_scaffold_29_12
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10380..11450
DNA (1071bp) protein (357aa)
Nucleoside recognition n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L905_9FIRM
Nucleoside recognition.
Nucleoside recognition {ECO:0000313|EMBL:CBL16100.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_13
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11464..13296
DNA (1833bp) protein (611aa)
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:CBL16101.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CBL16101.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Asparagine synthetase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L906_9FIRM
L2_019_000M1_scaffold_29_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13961..16492)
DNA (2532bp) protein (844aa)
Ricin-type beta-trefoil lectin domain n=1 Tax=Eubacterium rectale M104/1 RepID=D4JHM7_9FIRM
Ricin-type beta-trefoil lectin domain.
Ricin-type beta-trefoil lectin domain {ECO:0000313|EMBL:CBK93124.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_019_000M1_scaffold_29_15
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16638..16868
DNA (231bp) protein (77aa)
Predicted transcriptional regulator n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L909_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL16104.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_16
unknown

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16819..17064
DNA (246bp) protein (82aa)

This feature has no annotations

L2_019_000M1_scaffold_29_17
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17263..17700)
DNA (438bp) protein (146aa)
Large-conductance mechanosensitive channel n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L910_9FIRM
large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17734..18960)
DNA (1227bp) protein (409aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMF2_9FIRM
L2_019_000M1_scaffold_29_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19034..19795)
DNA (762bp) protein (254aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXP6_9FIRM
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:CCX81397.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
beta-lactamase domain-containing protein
L2_019_000M1_scaffold_29_20
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19926..21839)
DNA (1914bp) protein (638aa)
Fe-S oxidoreductase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L912_9FIRM
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:CBL16107.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21860..24616)
DNA (2757bp) protein (919aa)
FtsK/SpoIIIE family protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMC2_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:CCX81395.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ftsK; DNA translocase FtsK
L2_019_000M1_scaffold_29_22
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24638..25597)
DNA (960bp) protein (320aa)
Uncharacterized bacitracin resistance protein (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000313|EMBL:CBL16108.1};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Undecaprenyl-diphosphatase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L913_9FIRM
L2_019_000M1_scaffold_29_23
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25741..26550)
DNA (810bp) protein (270aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit ClpP {ECO:0000313|EMBL:CBL16109.1}; EC=3.4.21.92 {ECO:0000313|EMBL:CBL16109.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
ATP-dependent Clp protease proteolytic subunit ClpP n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L914_9FIRM
L2_019_000M1_scaffold_29_24
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26804..28102
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81392.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_019_000M1_scaffold_29_25
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28148..28540)
DNA (393bp) protein (131aa)
Predicted membrane protein n=2 Tax=Ruminococcus RepID=D4L915_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL16110.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_26
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28608..29186)
DNA (579bp) protein (193aa)
Small primase-like proteins (Toprim domain) (EC:3.1.26.8)
Small primase-like proteins (Toprim domain) {ECO:0000313|EMBL:CBL16111.1}; EC=3.1.26.8 {ECO:0000313|EMBL:CBL16111.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Small primase-like proteins (Toprim domain) n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L916_9FIRM
L2_019_000M1_scaffold_29_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29186..30229)
DNA (1044bp) protein (348aa)
DNA polymerase III, delta subunit n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L917_9FIRM
DNA polymerase III, delta subunit
DNA polymerase III, delta subunit {ECO:0000313|EMBL:CBL16112.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_29_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30231..32471)
DNA (2241bp) protein (747aa)
Predicted membrane metal-binding protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DME2_9FIRM
Predicted membrane metal-binding protein {ECO:0000313|EMBL:CCX81388.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted membrane metal-binding protein
L2_019_000M1_scaffold_29_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32484..33011)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81385.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_019_000M1_scaffold_29_30
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33379..33915)
DNA (537bp) protein (179aa)
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins (EC:2.4.2.7)
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins n=2 Tax=Ruminococcus RepID=D4L920_9FIRM
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins {ECO:0000313|EMBL:CCX81384.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Displaying items 1-30 of 152 in total

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