ggKbase home page

L2_019_000M1_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 232 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000M1_scaffold_69_1
unknown

Not on your lists

comp(512..745)
DNA (234bp) protein (78aa)

This feature has no annotations

L2_019_000M1_scaffold_69_2
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(684..2405)
DNA (1722bp) protein (574aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:CBL15731.1}; EC=5.4.2.8 {ECO:0000313|EMBL:CBL15731.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Phosphomannomutase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7Y6_9FIRM
L2_019_000M1_scaffold_69_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2626..5475)
DNA (2850bp) protein (950aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYU1_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCX81156.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_019_000M1_scaffold_69_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5668..7254)
DNA (1587bp) protein (529aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL15733.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
hypothetical protein
L2_019_000M1_scaffold_69_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7244..8197)
DNA (954bp) protein (318aa)
Glycosyltransferases involved in cell wall biogenesis (EC:3.1.26.3)
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL15734.1}; EC=3.1.26.3 {ECO:0000313|EMBL:CBL15734.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7Y9_9FIRM
L2_019_000M1_scaffold_69_6
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8534..9508
DNA (975bp) protein (325aa)
6-phosphofructokinase (EC:2.7.1.11)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339, ECO:0000313|EMBL:CBL15735.1};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
6-phosphofructokinase n=2 Tax=Ruminococcus RepID=D4L7Z0_9FIRM
L2_019_000M1_scaffold_69_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9608..11242
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81152.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_019_000M1_scaffold_69_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11245..12033
DNA (789bp) protein (263aa)
Small-conductance mechanosensitive channel n=2 Tax=Ruminococcus RepID=D4L7Z2_9FIRM
Small-conductance mechanosensitive channel
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:CBL15737.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_69_9
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12131..12454
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81150.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_019_000M1_scaffold_69_10
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12411..12602
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81149.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_019_000M1_scaffold_69_11
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12536..13237)
DNA (702bp) protein (234aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLR5_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
RNA polymerase, sigma 29 subunit, SigE
L2_019_000M1_scaffold_69_12
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13248..14051)
DNA (804bp) protein (268aa)
Sporulation factor SpoIIGA n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7Z4_9FIRM
Sporulation factor SpoIIGA.
Sporulation factor SpoIIGA {ECO:0000313|EMBL:CBL15739.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_69_13
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14318..15190)
DNA (873bp) protein (291aa)
EDD domain protein, DegV family n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7Z5_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:CBL15740.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_69_14
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15320..15607
DNA (288bp) protein (96aa)
Sporulation protein, YlmC/YmxH family n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7Z6_9FIRM
sporulation protein, YlmC/YmxH family
Sporulation protein, YlmC/YmxH family {ECO:0000313|EMBL:CBL15741.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_69_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15937..16869
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81143.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_019_000M1_scaffold_69_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17088..17810
DNA (723bp) protein (241aa)
30S ribosomal protein S2 n=2 Tax=Ruminococcus RepID=D4L7Z7_9FIRM
SSU ribosomal protein S2P
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_019_000M1_scaffold_69_17
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17867..18778
DNA (912bp) protein (304aa)
Elongation factor Ts n=2 Tax=Ruminococcus RepID=D4L7Z8_9FIRM
translation elongation factor Ts (EF-Ts)
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_69_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19112..19654
DNA (543bp) protein (181aa)
Translation initiation factor IF-3 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLQ0_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
infC; Translation initiation factor IF-3
L2_019_000M1_scaffold_69_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19678..19875
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Ruminococcus RepID=D4L7Z9_9FIRM
LSU ribosomal protein L35P
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_019_000M1_scaffold_69_20
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19918..20268
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=2 Tax=Ruminococcus RepID=D4L800_9FIRM
LSU ribosomal protein L20P
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_69_21
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20341..21123
DNA (783bp) protein (261aa)
rRNA methylases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L801_9FIRM
rRNA methylases
rRNA methylases {ECO:0000313|EMBL:CBL15746.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_69_22
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21120..22379
DNA (1260bp) protein (420aa)
DNA protecting protein DprA n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L802_9FIRM
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:CBL15747.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_69_23
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22461..24551
DNA (2091bp) protein (697aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CBL15748.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
DNA topoisomerase 1 n=2 Tax=Ruminococcus RepID=D4L803_9FIRM
L2_019_000M1_scaffold_69_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24552..25859
DNA (1308bp) protein (436aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L804_9FIRM
tRNA:m(5)U-54 methyltransferase
L2_019_000M1_scaffold_69_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25870..26850
DNA (981bp) protein (327aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Phosphate acyltransferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E6Z3_9FIRM
phosphate:acyl-[acyl carrier protein] acyltransferase
L2_019_000M1_scaffold_69_26
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26885..27562
DNA (678bp) protein (226aa)
RNAse III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Ribonuclease 3 n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L806_9FIRM
L2_019_000M1_scaffold_69_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27609..28550
DNA (942bp) protein (314aa)
Histone acetyltransferase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L807_9FIRM
Histone acetyltransferase
Histone acetyltransferase {ECO:0000313|EMBL:CBL15752.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_69_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28561..32136
DNA (3576bp) protein (1192aa)
Chromosome partition protein Smc n=2 Tax=root RepID=R5E8P8_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
chromosome segregation protein SMC
L2_019_000M1_scaffold_69_29
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32156..33070
DNA (915bp) protein (305aa)
Signal recognition particle receptor FtsY n=2 Tax=Ruminococcus RepID=D4L808_9FIRM
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_019_000M1_scaffold_69_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


33067..33672
DNA (606bp) protein (202aa)
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Non-canonical purine NTP pyrophosphatase n=2 Tax=Ruminococcus RepID=D4L809_9FIRM
Displaying items 1-30 of 232 in total

View Taxonomy